Streptomyces violaceoruber: B1H20_14360
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Entry
B1H20_14360 CDS
T05124
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B1H20_14360
09124 Replication and repair
03420 Nucleotide excision repair
B1H20_14360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svu03021
]
B1H20_14360
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_14360
Enzymes [BR:
svu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1H20_14360
Transcription machinery [BR:
svu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
B1H20_14360
DNA repair and recombination proteins [BR:
svu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
B1H20_14360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
ARF62454
UniProt:
A0A1V0UB25
LinkDB
All DBs
Position
3329217..3330860
Genome browser
AA seq
547 aa
AA seq
DB search
MTGPLIVQSDKTLLLEVDHELAEACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEYSRYPVPHALLVDIAETMARYGRLTLSKHPVHGLVLTTTDRPVLEEILR
SKKVQPLVGARIDPDTVAVHPSERGQVKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWS
LRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLVVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEALVRKHRGEQTLVIGQYIDQ
LDELGAHLDAPVIKGETSNAQREKLFDAFRNGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLAES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggacccctcatcgtccagagcgacaagacgctgctcctcgaagtcgaccacgag
ctggcggaagcctgccgccgtgccatcgcgccgttcgcggagctggagcgtgcgcccgag
cacatccacacgtaccgggtcaccccgctcgggctgtggaacgcccgcgccgccgggcac
gacgccgagcaggtcgtcgacgccctggtcgagtactcccgctaccccgtgccgcacgcg
ctcctggtcgacatcgccgagacgatggcgcggtacggccggctcaccctctccaagcac
cccgtgcacgggctggtcctcaccaccaccgaccggcccgtcctggaggagatcctccgg
tcgaagaaggtccagccgctggtcggcgcgcggatcgacccggacaccgtggccgtccac
ccctccgagcgcgggcaggtcaagcagacgctgctcaagctcgggtggcccgccgaggac
ctcgccggctacgtggacggcgaggcccatccgatcgagctggccgaggacggctggtcg
ctgcggccgtaccagaagcaggccgtggaggggttctggcacggtgggtccggggtcgtc
gtgctgccctgcggcgccgggaagacgctcgtcggggccggtgccatggccgaggccaag
gccaccacgctcatcctcgtcaccaacaccgtctccgcgcggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggtgagtacagcgggacccgcaaggag
atccggccggtcaccatcgccacctaccaggtgctgaccacccggcggaagggcgtctac
ccgcacctggagctgttcgactcccgcgactggggcctggtcgtgtacgacgaggtccac
ctgctgcccgcgcccgtcttcaagttcaccgccgacctccaggcccggcggcggctcggc
ctcacggcgacgctcgtacgcgaggacggtcgggagtccgacgtcttctcgctcatcggg
cccaagcggttcgacgcgccctggaaggagatcgaggcgcaggggtacatcgcgccggcc
gactgcgtcgaggtgcgggtcaacctcaccgactccgagcggctcgcgtacgccaccgcc
gagacggaggagaagtaccggttctgcgccaccaccgccaccaagcggaaggtgaccgag
gcgctggtgcgcaagcaccggggcgagcagaccctcgtcatcgggcagtacatcgaccag
ctcgacgaactgggcgcgcacctggacgcgccggtcatcaagggcgagaccagcaacgcc
cagcgcgagaagctcttcgacgcgttccggaacggggagatcagcgtcctcgtcgtctcc
aaggtcgccaacttctccatcgacctgcccgaggccaccgtcgccatccaggtcagcggc
accttcgggtcgcgccaggaggaggcgcagcggctgggccgcgtcctgcggccgaaggcc
gacgggcacgaggcgcggttctactcggtcgtcgcccgcgacaccatcgaccaggacttc
gcggcgcaccgccagcggttcctggccgagcaggggtacgcgtaccgcatcgtcgacgcg
gacgagctgctcgcggagagctga
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integrated database retrieval system
