Streptomyces violaceoruber: B1H20_18640
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Entry
B1H20_18640 CDS
T05124
Name
(GenBank) RNA polymerase subunit sigma-24
Organism
svu
Streptomyces violaceoruber
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Paralog
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Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ARF63168
UniProt:
A0A1V0UDX3
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All DBs
Position
complement(4275938..4277950)
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AA seq
670 aa
AA seq
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MSGNEQQEEPLDEIAAAGKDTRAAGRPAGHVPVRAARGASDGEHEGGTVLPGPWPAVAED
DASGGAGAGVGPHAVPQQRAGRSGAPESGLSDARLIEDMRAGDDQAYEELFRRHSAAVLR
YARSCCRDGHTADDLTAEVFARTLQAVRGGKGPTEAVRAYLMTAVRHVAAAWTKSSKREH
LVDDFAMFAAQATRSSELSDDDTLELGADVLAMHEAEQTMAMQAFRSLPERWQAVLWHTT
VEEESPSEIAPLFGLTANATAVLAGRAREGLKQAYLQAHVSRALTTGGDCAQYADRLGAH
ARGGLRTRAERGLRKHLDECARCRVAAGELEQVNAGIPALLPVAVIGWFAAGYALKAAGV
VAGGAVGAAGAGAAAAATGSGSTGGAAGGAAASEGLGTPAKAGIAAAVTVAAAAGLVWAL
VGDDQPKPEPKPVAKPPAVAPADPTPAPEPPPSAPKPKPEPPAAPAPPAPPGPAPSEPAP
EPTPSPTPSPEPPPEPAPPAPTPPPSPSPTPTPPPPSKPTPPPPAPEVYQVSELPYSVFG
DRSEPEVVMGQSSWIWQRSNVSIASTRYAHGVTVHARSSVTIRLNRPCTRYEAMVGVDDL
TMGLGAARFSVFNGDGARLWRSPVMKGGDPAVPVGVDISGQSSIRLVVEPEGTFGQVALA
DWAESRISCS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtaacgagcagcaggaagagccgctcgacgagatcgctgcggccggcaaggac
acgagggcggcggggcgacccgccgggcacgtgcccgtccgggccgcacgcggcgcgtcg
gacggcgagcacgagggcggcaccgttctgcccggcccgtggcccgccgtcgccgaggac
gacgcctccggcggagccggggcgggcgtcggcccgcacgccgttccgcagcagcgcgcc
ggtcgtagcggggctcccgagtccgggctctcggacgcccggctgatcgaggacatgcgg
gccggcgacgaccaggcgtacgaggagctgttccggcggcactcggccgccgtcctccgg
tacgcccgcagctgctgccgcgacgggcacaccgccgacgacctgacggccgaggtgttc
gcgcgcacgctccaggccgtacggggcgggaaggggcccacggaggcggtccgggcctac
ctgatgaccgccgtccgccatgtcgccgccgcctggacgaagagctccaagcgcgagcac
ctggtcgacgacttcgcgatgttcgccgcgcaggccacccgctcatcggagctctccgac
gacgacaccctcgaactcggcgccgacgtcctggcgatgcacgaggccgagcagacgatg
gcgatgcaggcgttccggagccttccggagcgctggcaggcggtcctgtggcacaccacc
gtggaggaggagtcgccgagcgagatcgccccgctgttcggcctcaccgccaacgccacc
gccgtgctggccggccgggcccgcgaagggctcaagcaggcatacctccaggcccacgtc
agccgggcgctcaccaccggcggggactgcgcgcagtacgccgaccggctcggcgcgcac
gcccggggcggcctgcgcacccgcgccgagcgcggtctgcgcaagcacctcgacgagtgc
gccaggtgccgggtggccgcgggcgagctggaacaggtgaacgccgggattccggcgctg
ctgcccgtcgcggtcatcgggtggttcgccgccggatacgcgctcaaggcagccggcgtg
gtggccggcggcgcggtcggggcggccggggcgggcgccgccgcggcggccaccgggtcc
ggttcgaccggcggggccgccgggggcgcggcggcctccgaggggctcggcacgcccgcc
aaggccgggatcgccgccgccgtgaccgtggccgccgctgccggactggtgtgggcgctc
gtcggcgacgaccagccgaagccggagcccaagccggtcgccaagccgccggccgtggca
ccggcggatcccacgcccgcgcccgagcccccgccgtcggctccgaagccgaagcccgaa
ccgccggcggcccccgcaccgcccgcgcccccggggccggccccgtccgagccggccccg
gagccgacgccgagccccacgccctcccccgagccgccgccggagcccgcgccgcccgcg
ccgactccgccgccgtccccctctccgacgccgacgccgccccctccgtccaagcccacc
ccgccgccgcccgcgccggaggtgtaccaggtcagcgagttgccgtactccgtcttcggg
gaccgcagcgagccggaggtggtgatggggcagagcagttggatctggcagcggtccaac
gtgtcgatcgcctccacccggtacgcgcacggggtgaccgtgcacgcccgctcctcggtg
accatccggctcaaccggccgtgcacccgctacgaggccatggtcggggtggacgatctg
acgatgggtctcggcgcggcgcgcttctccgtgttcaacggggacggggcgcggctgtgg
cgctccccggtgatgaagggcggcgaccccgccgtcccggtcggcgtggacatctccggc
cagtcctcgatccgcctggtggtggagcccgagggaacgttcggccaggtggcgctcgcc
gactgggcggagtcccggatcagctgctcctga
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