Streptomyces violaceoruber: B1H20_19935
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Entry
B1H20_19935 CDS
T05124
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_19935
DNA repair and recombination proteins [BR:
svu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1H20_19935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_22
Lon_C
DnaB_C
AAA_16
AAA
nSTAND3
AAA_14
DUF7125
NACHT
AAA_24
AAA_30
NTPase_1
RecA
ABC_tran
AAA_5
DAP3
PAXNEB
DUF7129
Rad51
AAA_29
RsgA_GTPase
MCM
AAA_19
ATPase_2
AAA_18
SLFN-g3_helicase
TniB
MMR_HSR1
NPHP3_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ARF63391
UniProt:
A0A1V0UE21
LinkDB
All DBs
Position
complement(4554774..4556186)
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AA seq
470 aa
AA seq
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MAARTKSAKDRPSYRCTECGWTTAKWLGRCPECQAWGTVEEFGGAPAVRTTAAGRVSTAA
LPIGQVDSRTATARSTGVGELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASDD
HRTLYVTAEESASQVRLRADRIKAINDHLYLAAETDLSAVLGHLDAVKPSLLVLDSVQTV
ASPEIDGAPGGMAQVREVAGALIRASKERGMATLLVGHVTKDGAIAGPRLLEHLVDVVLS
FEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGLFLTRRDVAVPGTCLTV
TLEGKRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRISALGKRDIYSA
TVGGVKLTEPAADLAVALALASAASDTPLPKNLVAIGEVGLAGEVRRVTGVQRRLAEAHR
LGFTHALVPTDPGKVPAGMKVTEVADMGDALRVLPRRSRQEAPQEDGARR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgtacgaaatccgcgaaggaccggccgtcctaccgctgcaccgaatgcggt
tggaccaccgccaagtggctcggccgttgccccgagtgccaggcgtgggggacggtcgag
gagttcggcggcgcccccgccgtgcgcaccaccgccgccggccgggtctccacggccgcg
ctgccgatcggccaggtcgacagccggacggcgaccgcccgctcgacgggcgtcggcgag
ctggaccgggtgctgggcggcgggctcgtcccgggcgcggtcgtgctgctggcgggcgag
ccgggcgtcggcaagtcgacgctgctgctggacgtggcggccaaggcggcgagcgacgac
caccgcacgctgtacgtgaccgccgaggagtccgcgagccaggtccggctgcgcgccgac
cggatcaaggcgatcaacgaccacctctacctcgcggcggagaccgatctgtcggcggtg
ctcggccacctggacgcggtgaagccctcgctgctggtcctggactcggtgcagacggtc
gcctcgccggagatcgacggcgcgcccggcgggatggcccaggtccgggaggtcgccggg
gcgctgatccgggcgtccaaggagcgcgggatggccacgctgctggtcggccacgtcacc
aaggacggcgcgatcgccgggccccggctgctggagcacctggtggacgtggtgctctcc
ttcgagggcgaccggcacgcccggctgcggctggtgcggggcgtcaagaaccgttacggc
gcgaccgacgaggtcggctgcttcgaactgcacgacgagggcatcaccggactcgccgac
ccctcgggcctcttcctgacccgccgcgacgtggcggtgccgggcacctgcctcaccgtg
acgctggagggcaagcgaccgctggtggccgaggtgcaggcgctgaccgtcgactcgcag
atcccctcgccccggcgcaccacctccggcctggagacctcgcgggtgtcgatgatgctc
gccgtgctggagcagcgcggccggatcagcgcgctcggcaagcgggacatctacagcgcg
acggtgggcggcgtgaagctcaccgagcccgcggccgacctggccgtcgcgctcgcgctg
gcaagcgcggccagcgacacccccctcccgaagaacctggtcgcgatcggcgaggtgggc
ctcgcgggcgaggtcaggcgggtcaccggggtgcagcggaggctggccgaggcgcaccgg
ctgggcttcacccacgccctcgtcccgacggacccggggaaggtcccggccggtatgaag
gtcacggaagtcgccgacatgggcgacgctctgcgggtcctcccgcgccgctctcgccag
gaggcaccacaggaggacggcgcgcgccggtag
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