Streptomyces violaceoruber: B1H20_22185
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Entry
B1H20_22185 CDS
T05124
Symbol
gabD2
Name
(GenBank) succinic semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu00250
Alanine, aspartate and glutamate metabolism
svu00310
Lysine degradation
svu00350
Tyrosine metabolism
svu00650
Butanoate metabolism
svu00760
Nicotinate and nicotinamide metabolism
svu01100
Metabolic pathways
svu01120
Microbial metabolism in diverse environments
Module
svu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
B1H20_22185 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
B1H20_22185 (gabD2)
00310 Lysine degradation
B1H20_22185 (gabD2)
00350 Tyrosine metabolism
B1H20_22185 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
B1H20_22185 (gabD2)
Enzymes [BR:
svu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
B1H20_22185 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
B1H20_22185 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
B1H20_22185 (gabD2)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ARF63789
UniProt:
A0A1V0UF03
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Position
5019936..5021552
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AA seq
538 aa
AA seq
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MTDSQAPDAPLGTNPVAVAPAGVRTAADVVTPEVIAQLTRGVVGSGRTANHTPFTGEKLA
DLPESTPEDVATAFDRARAAQPAWAAVPVRQRAAVLLRFHDLVLSRQSEVLDLIQLETGK
ARLHAHEEVQAVAVAARHYGRKAAGYLKPRRHTGVVPTLTKVTELRQPRGVIGQIAPWNY
PLELSVGDALPAFVSGNAVVMKPDTETALTALWARDLLIEAGLPAEVFQVVLGEGPVVGP
EVVSRADYVSFTGSTRTGREVAVGAASRLVGVSLELGGKNAMLVLADADVEKAAAGAVRA
CFSSAGQLCISIERLYVHESIADDFVQRFAARTRAMRLGSSLAYGADMGSLVGERQLETV
ARHVEEAVEKGATLIAGGVARPDIGPLFYEPTILDGVEAPMAVCTEETFGPVVSIYRFSD
EDEVIGLANATPYGLNSSVWTTDSRRGHEVAARLRTGTVNINEGYAPAYGSVQSPMGGMK
DSGLGRRHGSEGILKYTEAQTVAQQRLIPLAPAFGMDDEKYAAFMTRSLKAMKAFRLR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcgcaggcccctgacgcccctctcggtaccaaccccgtggcggtcgccccc
gccggcgtgcgcaccgccgccgacgtggtcacccccgaggtgatcgcccagctcacccgc
ggtgtcgtcgggtcgggccgtacggccaaccacaccccgttcaccggggagaagctggcc
gacctgcccgagtccacccccgaggacgtcgccaccgccttcgaccgggcccgcgccgcc
cagcccgcctgggccgccgtgcccgtacggcagcgggccgcggtcctcctgcgcttccac
gacctcgtcctcagccgccagtccgaggtcctcgacctcatccagctggagaccggcaag
gcccgtctgcacgcccacgaggaggtgcaggccgtcgcggtcgccgcccgccactacggg
cgcaaggccgccggatacctcaagccccgccgccacaccggcgtcgtcccgaccctcacg
aaggtcaccgaactgcgccagccgcgcggcgtcatcggccagatcgccccgtggaactac
ccgctggagctgtccgtgggcgacgcgctgcccgcgttcgtctccggcaacgccgtcgtg
atgaagcccgacaccgagaccgcgctcaccgccctgtgggcccgcgacctgctgatcgag
gccggcctgcccgccgaggtcttccaggtcgtcctcggcgagggcccggtcgtcggcccg
gaggtcgtcagccgcgccgactacgtctccttcaccggctccacccgcaccggccgcgag
gtcgccgtcggcgccgcctcccggctggtcggcgtctcgctggagctcggcggcaagaac
gccatgctcgtcctggcggacgccgacgtggagaaggccgcggcgggtgccgtccgcgcc
tgcttctcctcggccggacagctctgcatctcgatcgagcggctgtacgtccacgagtcc
atcgccgacgacttcgtgcagcggttcgccgcccgcactcgggccatgcggctcggcagc
tccctcgcgtacggggccgacatgggctcgctcgtcggtgaacgccagctggagacggtc
gcccgccacgtggaggaggccgtcgagaagggcgcgaccctcatcgccggcggggtcgcc
cgccccgacatcggcccgctgttctacgagccgaccatcctcgacggggtcgaggccccg
atggccgtctgcaccgaggagaccttcggcccggtcgtctcgatctaccggttcagcgac
gaggacgaggtgatcggactggccaacgccaccccgtacggcctcaactccagcgtctgg
accaccgactcccggcgcggccacgaggtcgccgcccggctgcgcaccggcactgtcaac
atcaacgaggggtacgcccccgcctacggcagcgtccagtccccgatgggcggcatgaag
gactccggcctcggcaggcggcacggctccgagggcatcctcaagtacaccgaggcccag
accgtcgcccagcagcggctgatcccgctcgcgcccgccttcgggatggacgacgagaag
tacgccgcgttcatgacccgcagcctcaaggcgatgaaggcgttcagactgcgctga
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