Streptomyces violaceoruber: B1H20_22330
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Entry
B1H20_22330 CDS
T05124
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
Organism
svu
Streptomyces violaceoruber
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
Sigma70_r4_2
HTH_31
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ARF63815
UniProt:
A0A1V0UEZ3
LinkDB
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Position
complement(5058399..5059793)
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AA seq
464 aa
AA seq
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MTRSTTDEAAAEPLPSPKERRRLREAKSLSEDQVAAAVGVTRATVRSWETGRTSPRGRKR
ALYAKVLAAETKPEAEPEASPGAGPGPGVESVTEPTATEPAVEPAAVKPAAVKPAAVKPA
AVVAAATEPVVEPGADSADARPAAKPAGRAAGKASTKAAVKPAPHPVTRPESVKTGAEPE
RGLPAPPPEEPDFSPADAFDELYARTALGLVRQTYLLTGRRALALESVERAFQLAWHRWP
EVAVDRDPAGWVRAAAYEFAMSPWHRMRRTHRHPDAPPTEPGRRALFDALLDLPPAYRRT
LLLYDGVGLDLPETAAETEASTPAAAGRLMTARAALAERFPEVAEAATPAAQSALLHERL
GGLARAENVPVPRPAEAVRTGGENRARLWTRAAIAGVALLMVVTGLTLHTAPTHYEQPIS
PAERVGGVPPRGGPQQLTAQDLKLQQSLREQVAHGPERLVPETR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacccggagtacgaccgacgaggccgccgcggaaccgctgccctcgcccaaggagcgc
cgcagactgcgcgaggcgaaatccctgagcgaggatcaggtggcggcggccgtgggggtc
acacgcgccaccgtgcgctcctgggagacggggcgcacgagcccgcgcggacgcaagcgc
gcgctgtacgcgaaggtgctcgccgcagagacgaaaccggaagcggaaccggaggcgagc
ccgggagcggggccggggccgggcgtcgagtccgtgacggagccgacggccacggagccg
gcggtcgagccggcggcagtgaagcctgcggcggtgaaaccggcggccgtgaagcctgcg
gccgtggtggcggcggccaccgagccggtggtggagcccggcgcggattcggcggatgcg
cgtccggccgcgaaaccggcgggacgggcggccgggaaggcatcgacgaaagccgcggtg
aaaccggcgccgcaccccgtgacgcggcccgagtccgtgaagaccggggcggagccggaa
cggggccttcccgcgccgccgcccgaggagccggacttctctcccgccgacgcgttcgac
gagctctacgcccggaccgccctcggcctcgtccggcagacgtacctgctgaccggccgc
cgcgccctggctctcgaatccgtggagcgcgccttccaactggcctggcaccgctggccc
gaggtcgccgtcgaccgcgatccggccggctgggtgcgggccgccgcgtacgagttcgcg
atgtcgccctggcaccggatgcgccgcacgcaccggcaccccgacgccccgcccacggaa
ccgggcaggcgggcgctgttcgacgcactgctcgacctgcccccggcctaccggcgcacc
ctgctcctgtacgacggggtcggcctggaccttccggagaccgccgccgagacggaggcc
agcactccggcggccgcgggccggctgatgaccgcccgcgccgccctcgcggagcggttc
ccggaggtggcggaggccgcaacgcccgccgcgcagtccgccctgctgcacgagcggctc
ggcggcctcgcccgcgccgagaacgtccccgtaccgcgccccgccgaggctgtgcgcacc
ggcggcgagaaccgggcccggctgtggaccagggccgccatcgcgggcgtcgcgctgctc
atggtcgtcaccgggctcaccctgcacaccgcgcccacccactacgagcagccgatctcc
cccgccgaacgggtcgggggcgtaccgccgcgcggaggaccgcagcagctcaccgcccag
gacctgaagctccagcagtcgctgcgcgagcaggtggcgcacggcccggagaggctggtt
ccggaaacccgctga
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