Streptomyces violaceoruber: B1H20_24315
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Entry
B1H20_24315 CDS
T05124
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu03420
Nucleotide excision repair
svu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1H20_24315
03430 Mismatch repair
B1H20_24315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_24315
Enzymes [BR:
svu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1H20_24315
DNA repair and recombination proteins [BR:
svu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1H20_24315
MMR (mismatch excision repair)
Other MMR factors
B1H20_24315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
C1_1
Zn_ribbon_TiaS
APOBEC1
Motif
Other DBs
NCBI-ProteinID:
ARF64154
UniProt:
A0A1V0UFZ4
LinkDB
All DBs
Position
5527882..5530158
Genome browser
AA seq
758 aa
AA seq
DB search
MPHPCGQPPHPPPGTWQHGGVTAATHSTLFPQVPDTPDAVLDGLDPEQREVALALHGPVC
VLAGAGTGKTRAITHRIAYGVRAGILQPATVLAVTFTNRAAGEMRGRLRQLGATGVQART
FHSAALRQLQYFWPKAVGGELPRLLERKVQLVSEAAARCQIRLDRTELRDATSEIEWAKV
TQTVPADYAAAVVKAQRDAPRDPAELAQIYSTYEQLKRDRSVIDFEDVLLLMVGILQDRA
DIAEHVRGQYQHFVVDEYQDVSPLQQRLLDLWVGDRDDLCVVGDASQTIYSFTGATPDHL
LNFRTRHPGATVVKLVRDYRSTPQVVHLANGLLSQARGKAADHRLELVSQRDKGPEPVYT
EYGDEPTEAESTARRIRDLIAAGVPAGEIAVLYRVNSQSEVYEQALADAGVPYQLRGAER
FFERAEVREAGTALRGAARAGGNDSLLDGADDLAAQVRAVLSTKGWTTRPPAGSGAVRDR
WESLAALVRLAEDFEAARPGATLTDLVRELDERAAAQHAPTVQGVTLASLHAAKGLEWDA
VFLVGLTEGMMPIAYAKTDEQVEEERRLLYVGITRARVHLSLSWALSRSPGGRASRRATR
FLNGLRPGSGTVGARGGTGGGGGIDRGTARTAANRAPAVERKPRSPVRCRVCGRTLTDAG
EMKLMRCEDCPSDMDEGLYERLHDWRAAQAALLGQPDFCVFTEKTLMAIAEAVPSTEGEL
VVIAGVGNRKLNRFGTDVLAICAGETVGDEAPQDTDET
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacccctgtggacaaccgccgcatccgcccccggggacctggcagcatggcggg
gtgacagcagcaacgcactccaccctcttcccgcaggttcccgacaccccggacgccgtg
ctcgacgggctcgaccccgagcagcgcgaggtggcgctcgccctgcacggaccggtgtgc
gtgctggccggagccggtacgggcaagacccgcgcgatcacccatcgcatcgcctacggg
gtgcgcgccggcatcctccagccggccaccgtgctcgccgtcaccttcaccaaccgggcc
gccggagagatgcgcggacggctccgccagctcggcgcgaccggcgtccaggcgcggacc
ttccactccgccgcgctccggcagctccagtatttctggccgaaagcagtcggtggtgag
ctgccccggctgctggagcggaaggtgcagctggtctccgaggccgccgcccgctgccag
atccggctcgaccgcaccgagctgcgcgacgcgacgagcgagatcgagtgggccaaggtc
acccagaccgtccccgccgactacgcggcggccgtggtcaaggcccagcgggacgccccc
cgcgacccggcggagctcgcccagatctactccacgtacgagcagctcaagcgcgaccgc
tcggtgatcgacttcgaggacgtgctgctgctgatggtcggcatcctccaggaccgggcg
gacatcgcggagcacgtgcgcggccagtaccagcacttcgtggtcgacgagtaccaggac
gtcagcccgctccagcagcggctgctcgacctctgggtcggcgaccgggacgacctctgc
gtggtgggcgacgccagccagacgatctactccttcaccggggccacccccgaccacctg
ctgaacttccgcacccgccaccccggggcgaccgtggtcaagctggtccgcgactaccgc
tccaccccccaggtcgtccacctcgccaacggcctgctgagccaggcccgcggcaaggcc
gccgaccaccgcctggagctggtctcgcagcgcgacaagggccccgagccggtctacacg
gagtacggggacgagcccaccgaggccgagtccaccgcccgccgcatccgcgacctcatc
gccgcgggcgtcccggccggcgagatcgccgtgctctaccgcgtcaactcccagtccgag
gtctacgagcaggccctcgccgacgccggggtcccctaccagctgcgcggcgccgagcgg
ttcttcgagcgggccgaggtccgcgaggcgggcaccgccctgcgtggagcggcccgcgcc
gggggcaacgactccctgctcgacggggcggacgacctggccgcccaggtgcgggcggtg
ctctccaccaagggctggaccacgcgtcccccggccgggtccggcgcggtgcgcgaccgc
tgggagtcactggccgcactggtccggctcgcggaggacttcgaggcggccaggccgggg
gcgacgctcaccgacctggtccgcgagctggacgaacgggcggccgcccagcacgcgccc
acggtccagggcgtcacgctggcctccctgcacgcggcgaagggcctggagtgggacgcc
gtcttcctggtcggtctcaccgagggcatgatgccgatcgcctacgccaagaccgacgaa
caggtcgaggaggagcgccgcctgctgtacgtcggcatcacccgcgcccgcgtgcacctc
tcgctctcctgggcgctgtcccggtccccgggcggccgggcgagccgtcgggccacccgc
ttcctgaacgggctgcggccgggctcggggaccgtcggcgcgcgcggcgggaccggtggc
ggcggcggtatcgaccggggcaccgccaggaccgcggcgaaccgggccccggcggtcgag
cgcaagcccaggagccccgtgcggtgccgggtctgcgggcggacgctgaccgacgcgggc
gagatgaagctgatgcgctgcgaggactgcccctcggacatggacgagggactgtacgag
cggctgcacgactggcgcgccgcccaggcggccctgctcggccagcccgacttctgcgtc
ttcaccgagaagacgctcatggcgatcgcggaggccgtcccgtccacggagggcgagctc
gtcgtcatcgccggcgtcggcaaccggaagctgaaccgcttcggcaccgatgttctggcc
atctgcgcaggtgagaccgtcggtgacgaggccccgcaggacaccgacgagacctga
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integrated database retrieval system
