Streptomyces violaceoruber: B1H20_27130
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Entry
B1H20_27130 CDS
T05124
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1H20_27130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svu03019
]
B1H20_27130
03016 Transfer RNA biogenesis [BR:
svu03016
]
B1H20_27130
Enzymes [BR:
svu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B1H20_27130
Messenger RNA biogenesis [BR:
svu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B1H20_27130
Transfer RNA biogenesis [BR:
svu03016
]
Prokaryotic type
tRNA degradation factors
B1H20_27130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
CdsD_C
PCB_OB
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
ARF64660
UniProt:
A0A1V0UHV5
LinkDB
All DBs
Position
6193027..6195240
Genome browser
AA seq
737 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKDN
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETVMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEIVAAGLEAAKPFIKTLC
KAQADLASKAAKPEGDFPVFLDYQDDVLDALAKAVTPELKQALTIAGKQERETELDRVKE
IAAEKLLPEFEGREKEISAAYRALTKKLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEEDEKKDDTDK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcaccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttccaagcggcccaaggacaac
ctcgacttcttccccctcacggtggacgtcgaggagcggcagtacgcggccggcaagatc
cccggctccttcttccgccgcgagggccgcccctccgaggacgccatcctcacctgccgt
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacggtcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcc
gcctcctgctccacccagctcgcgggcctgcccttctccggcccgatcggcgccacccgc
gtcgccctgatcaagggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtcaaggacggcgccgaggctccc
accgaggagatcgtcgccgccggtctggaagcggcgaagcccttcatcaagaccctctgc
aaggcgcaggccgacctggcgtccaaggccgccaagcccgagggcgatttcccggtcttc
ctggactaccaggacgacgtcctcgacgccctcgccaaggccgtcacgcccgagctgaag
caggcgctcaccatcgccggcaagcaggagcgcgagaccgagctggaccgcgtcaaggag
atcgccgccgagaagctcctcccggagttcgagggccgcgagaaggaaatctccgccgcg
taccgcgcgctgaccaagaagctggtccgcgagcgcgtcatcaaggacaaggttcgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgccatcgtgccggtcctcccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctcaaccatgtcgctgctgaacgccggtgtgccc
ctcaaggccgccgtcgccggtatcgccatgggcctgatctcgcaggagatcgacggcaag
acccactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaagcagttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcccgtctgcac
atcctggacgtcatgaacgaggccatcgacgtcccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
acgatctacatcggtgcgcagcagggctcgcaggccgaggccgcccgcgccacgatcaac
gccatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtctcgctcatgccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtcgagaacgtcgaggacgtgctcggc
gtcggcgccaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctc
atccccgtcatcgagggtgaagaggacgagaagaaggacgacaccgacaagtga
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