Streptomyces violaceoruber: B1H20_27225
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Entry
B1H20_27225 CDS
T05124
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svu03009
]
B1H20_27225
Enzymes [BR:
svu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B1H20_27225
Ribosome biogenesis [BR:
svu03009
]
Prokaryotic type
ribosomal protein modification factors
B1H20_27225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
ARF64673
UniProt:
A0A1V0UHF2
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Position
6222692..6224173
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AA seq
493 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWDLVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDAAVALPGHAQEAPAPVPEDLPEGVAPVSGPRAPL
RRRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLQETRWLAEQGVKEVMLV
SENNTSYGKDLGDIRLLETLLPELADVDGIERIRVSYLQPAEMRPGLIDVLTSTPKVAPY
FDLSFQHSAPGVLRAMRRFGDTDRFLELLDTIRSKAPEAGARSNFIVGFPGETEADLAEL
ERFLTGARLDAIGVFGYSDEEGTEAVGYENKLDADTIAERLAHISQLAEELTSQRAEERV
GETLQVLVESVESDEDGEVVIGRAAHQAPETDGQVVFTTREGLVPGRMVEAKAVGTEGVD
LVAEHHDLAEVAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagcttgcaggccgcttggcagcggacggctgggacctcgtcgaggacgcctcg
gacgcggatgtcgcagtcgtcaacacctgtgggttcgtcgaagccgccaagaaggactcc
gtcgacgccctgctcgaagcgaacgatctgaaggaccacggccgcacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggacctcgccgaggcccttccggaggcg
gacggcgtcctcggattcgacgactacgccgacatctccgaccggctccagaccatcctc
aacggcggcatccacgcctcgcacaccccgcgcgaccgccgcaagctgctgccgatcagt
cccgccgagcggcaggacgccgccgtggcgctgcccggccacgcccaagaggcgcccgcc
ccggtccccgaggacctgccggagggggtcgctccggtctccgggccccgggcgccgctg
cgccgccgcctcggcaccagccccgtcgcctcggtgaagctcgcctcgggctgcgaccgc
cgctgctccttctgcgcgatcccctccttccgcggttcgttcatctcgcggcgcccctcg
gacgtgctccaggagacccgctggctggccgagcaaggcgtcaaggaggtcatgctcgtc
tccgagaacaacacctcctacggcaaggacctcggcgacatccggctgctggagaccctg
ctgcccgagctggccgacgtggacggcatcgagcggatccgtgtcagctacctccagccc
gccgagatgcgtcccggtctcatcgacgtcctcacctcgacgccgaaggtcgccccgtac
ttcgacctctccttccagcactccgcccccggcgtgctgcgcgcgatgcgccgcttcggc
gacaccgaccgcttcctggagctgctggacaccatccggagcaaggcccccgaggctggc
gcccgctccaacttcatcgtcggcttccccggtgagaccgaggccgacctcgcggagctg
gaacgcttcctcaccggcgcccgcctcgacgcgatcggcgtcttcggctactccgacgag
gagggcaccgaagcggtgggctacgagaacaagctcgacgccgacaccatcgcggagcgc
ctcgcccacatctcccagctggccgaggagctgacctcgcagcgcgccgaggagcgcgtg
ggggagaccctccaggtgctggtggagtccgtggagtcggacgaggacggcgaggtcgtg
atcgggcgcgcggcgcaccaggcgcccgaaacggacggccaggtggtcttcaccacacgc
gagggactggtgccgggccgtatggtcgaggcgaaggcagtgggcaccgagggcgtcgac
ctggtggccgaacaccacgaccttgcggaggtagccagatga
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