Streptomyces violaceoruber: B1H20_27585
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Entry
B1H20_27585 CDS
T05124
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svu03032
]
B1H20_27585
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_27585
Enzymes [BR:
svu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B1H20_27585
DNA replication proteins [BR:
svu03032
]
Prokaryotic type
DNA Topoisomerases
B1H20_27585
DNA repair and recombination proteins [BR:
svu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B1H20_27585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ARF64737
UniProt:
A0A1V0UHY9
LinkDB
All DBs
Position
complement(6309632..6312085)
Genome browser
AA seq
817 aa
AA seq
DB search
MARRSTKTPPPDDFEEKILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGMKPVHRRIVS
QMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMADATSLMTEAIDEDTVDFQSNYDGQEREPVVLPAAYPNLLVN
GVSGIAVGMATNMPPHNLGEVIAAARHLIKHPGADVETLMRFVPGPDLPTGGRIVGLGGI
KDAYTGGRGTFKIRATVAVENVTARRKGLVVTELPFAVGPEKVISKIKDLVSAKKLQGIA
DVKDLTDRAHGLRLVIEVKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLQVYLDHRFEVVRRRSEFRRTKRRDRLHLVEGLLVALLDIDEVIRIIRDSDNSAQAKER
LMAHFSLSEIQTQYILDTPLRRLTRFDRIELEDERSKLNSEIEALTAILESDAELRKMVS
AELAAVAKKFGTDRRTVLLESAGSQIAAVPLEVADDPCRVLLSSTGLLARTANAEPVEIS
EDARRTKHDVIVSAVAATARGDVGAVTSAGRLLRLSVIDLPQLPDTHAEPNLSGGAQISE
FLTLEAGEELICLTTLEESSPGLAIGTLQGVVKRVVPDYPANKDELEVITLKDGDRIVGA
TELRTGEEDLVFITSDAQLLRYPAASVRPQGRPAGGMAGVKLAAGAEVLSFSAVDPASEA
IVFTVAGSHGTLDDSVLTSKLTPFDQYPRKGRATGGVRCQRFLKGEDVLVFAWAGPAPAR
AAQKNGTPAKLPEPDPRRDGSGTPLLEKVAVIAGPPL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtagcacgaagaccccgcctccggacgacttcgaggagaagatcctcgac
atcgacgtcgtcgacgaaatgcagggttccttcctcgagtacgcgtactcggtgatctac
tccagggccctgcccgacgcccgcgacggcatgaagccggtgcaccggcgcatcgtgtcc
cagatgaacgagatgggcctgcggcccgaccggggctatgtgaagtgcgcccgcgtcgtc
ggcgaggtgatgggcaagctgcacccgcacggcgacgcctcgatctacgacgcgctcgtg
cggatggcgcagcccttctcgatgcggctgcccctggtcgacggtcacggcaacttcggc
tcgctcggcaacgacgacccgccggccgccatgcggtacaccgagtgccggatggccgac
gcgacctcgctgatgaccgaggcgatcgacgaggacaccgtcgacttccagtcgaactac
gacggccaggagcgcgagccggtcgtcctcccggccgcctaccccaacctcctggtcaac
ggggtgtccgggatcgccgtgggcatggccaccaacatgccgccgcacaatctgggcgag
gtcatcgccgccgcccggcacctgatcaagcacccgggcgccgacgtcgagacgctgatg
cggttcgtccccggccccgacctgcccaccggcggccgcatcgtggggctcggcgggatc
aaggacgcgtacacggggggccggggcacgttcaagatccgcgccaccgtcgccgtggag
aacgtgacggcccgccgcaagggcctcgtcgtcaccgaactccccttcgccgtcggcccg
gagaaggtgatctccaagatcaaggacctggtctcggcgaagaagctccagggcatcgcc
gacgtcaaggacctgaccgaccgggcgcacgggctgcgtctggtcatcgaggtgaagaac
ggcttcgttccggaagcggtgctggagcagctctacaagctgacgccgatggaggagtcc
ttcggcatcaacaacgtggcgctggtcgacggccagccgctcaccctgggcctcaaggag
ctgctgcaggtctacctcgaccaccgcttcgaggtggtgcgccggcgcagcgagttccgc
cgcaccaagcgccgcgaccggctgcacctggtcgagggcctcctcgtcgcgctcctcgac
atcgacgaggtcatccggatcatccgggacagcgacaactccgcgcaggcgaaggagcgt
ctgatggcgcacttctcgctgagcgagatccagacgcagtacatcctggacaccccgctg
cgccggctcacccgcttcgaccggatcgagctggaggacgagcggtccaagctgaacagc
gagatcgaggcgctgaccgcgatcctggagtcggacgcggagctgcgcaagatggtctcc
gcggagctggccgccgtggcgaagaagttcggcacggaccgtcgcacggtgctgctggag
tcggccggttcgcagatcgcggccgtgccgctggaggtggcggacgacccgtgccgggtg
ctgctctcctccacgggtctgctggcccgtacggcgaacgcggagccggtcgagatctcc
gaggacgcccggcgcaccaagcacgacgtgatcgtttcggcggtggcggcgacggcgcgc
ggcgacgtcggtgcggtcacctcggcgggccggctcctgcggctctcggtgatcgacctg
ccgcagctcccggacacgcacgccgagccgaatctctccggcggcgcgcagatctccgag
ttcctgacgctggaggcgggcgaggagctgatctgcctcaccacgctggaggagtcctcg
ccggggctggcgatcggcaccctccagggtgtggtgaagcgtgtcgtgccggactacccg
gccaacaaggacgagttggaggtcatcaccctcaaggacggtgaccggatcgtcggggcg
accgagctgcgtacgggcgaggaggatctggtgttcatcacctctgacgcccagttgctc
cgctatccggcggcttcggtgcgcccgcaggggcggcccgccgggggcatggcgggcgtc
aagctggcggcgggggccgaggtgctgtcgttctcggcggtggacccggcgtccgaggcg
atcgtgttcacggtggccggttcgcacggaacgctggacgactcggtgctgacgtccaaa
ctcaccccgttcgaccagtacccgcgcaagggccgggcgaccggcggggtgcgctgtcag
cggttcctgaagggcgaggacgtgctggtcttcgcctgggcgggtccggccccggcccgg
gccgcgcagaagaacggcaccccggccaagctgccggagccggacccgaggcgggacggt
tcgggcacgccgctgctggagaaggtggccgtgatcgcgggcccgccgctgtag
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