Streptomyces violaceoruber: B1H20_29870
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Entry
B1H20_29870 CDS
T05124
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu00523
Polyketide sugar unit biosynthesis
svu01100
Metabolic pathways
svu01110
Biosynthesis of secondary metabolites
svu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
B1H20_29870
Enzymes [BR:
svu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
B1H20_29870
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
DUF6053
Motif
Other DBs
NCBI-ProteinID:
ARF65147
UniProt:
A0A1V0UJ55
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Position
complement(6852484..6853788)
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AA seq
434 aa
AA seq
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MSHRKDRLLAEVRAYHREQESDGRFEPGVTEIWPSGAVLDANDRVALVEAALTMRIAAGS
DCRKFESAFARRLGLRKAHLTNSGSSANLLALTALTSPVLGERRLRPGDEVITVAAGFPT
TVNPIIQNGLVPVFVDIELGTYNATAEHVARAIGPRTRAISMAHALGNPFQAAEIAELAE
AHGLFLVEDNCDAVGSTYRGRLTGTFGDLSTVSFYPAHHLTMGEGGCVLTSNMALARVVE
SLRDWGRDCWCEPGESNRCLKRFSYQMGTLPEGYDHKYIFSHVGYNLKATDIQAALGRSQ
LNRLDEFCAARRHNWRRLREGLDGLPHLLLPRATEGSDPSWFGFVMTIGPEAPFTTAELV
AFLEERRIGTRRLFAGNLTAHPAYQGVEHRVSGTLTNSDIVTGRTIWTGVYPGLTDEMID
YVVTSIKEFVAARG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccgcaaggaccgcctcctcgcggaggtgcgcgcctaccaccgggagcaggaa
tccgacgggcgcttcgagccgggggtcaccgagatctggccctcgggcgccgtgctcgac
gcgaacgaccgggtggcgctcgtggaggcggcgctcacgatgcggatcgcggcgggctcc
gactgccggaagttcgagtcggcgttcgcccgccggctcgggctgcgcaaggcgcacctg
accaactcgggctcctcggcgaacctcctggcgctcaccgccctcacctcgcccgtgctg
ggcgaacgcaggctgcggccgggcgacgaggtgatcaccgtcgcggccgggttccccacc
acggtcaacccgatcatccagaacggtctggtgccggtcttcgtcgacatcgaactcggc
acctacaacgccaccgccgagcacgtggcccgcgcgatcggaccgcgtacccgggccatc
tccatggcgcacgcgctgggcaaccccttccaggcggccgagatcgccgaactcgccgag
gctcacggcctgttcctcgtcgaggacaactgcgacgcggtgggctccacctaccgcggc
cggctcaccggcacgttcggcgacctgtcgaccgtcagcttctatccggcgcaccacctg
acgatgggcgagggcggctgcgtcctgacctcgaacatggcgctggcccgggtggtggag
tcgctgcgcgactgggggcgcgactgctggtgcgagccgggcgagagcaaccggtgcctc
aagcgcttctcgtaccagatgggcacgctgccggagggctacgaccacaagtacatcttc
tcgcacgtggggtacaacctgaaggcaacggacatccaagcggcgctgggccgcagccag
ttgaaccggctcgacgagttctgcgcggcacgtcggcacaactggcggcggctgcgcgag
gggctggacgggctgccgcacctgctgctgccccgggccaccgagggcagcgatccgagc
tggttcggcttcgtcatgacgatcggtcccgaggcgccgttcacgacggcggagctggtg
gcgttcctggaggagcgcaggatcggcacccgtcggctgttcgccggcaacctcacggcg
caccccgcctaccagggggtggagcaccgggtgtccgggacgctgaccaacagcgacatc
gtcaccgggcggaccatctggaccggcgtctacccggggctcaccgacgagatgatcgac
tacgtcgtcacctccatcaaggagttcgtcgcggcccgcggctga
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