Streptomyces violaceoruber: B1H20_32230
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Entry
B1H20_32230 CDS
T05124
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu00300
Lysine biosynthesis
svu00470
D-Amino acid metabolism
svu01100
Metabolic pathways
svu01110
Biosynthesis of secondary metabolites
svu01120
Microbial metabolism in diverse environments
svu01230
Biosynthesis of amino acids
Module
svu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B1H20_32230
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B1H20_32230
Enzymes [BR:
svu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B1H20_32230
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ARF65568
UniProt:
A0A1V0UKU6
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All DBs
Position
complement(7408537..7409955)
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AA seq
472 aa
AA seq
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MTQTTSGHDEHGTAAPATALSTRHDPRFDAVVRAAVEQGLLGEGGEVAGFVDTEGVRGSV
AALHDAFSGAPGVLHTFAAKACSLIPVLRLLADCGMGCEVASPGELRLALDAGFAASRIV
LDSPAKTREELRSALALGVSVNADSLDELRRIDALRAPDSASVVGLRINPQVGGGAIGAM
STATDTSKFGVALCDPGAREAIVRAFRERPWLTRLHAHVGSQGCPLELIAAGVSRTYELA
EEINAALGVRQVTGLDIGGGLSVNFTDGTVRPTYADYVAALTAAVPGLLSGRYALITEFG
RSLLAKNGFIGARVEYVKDAGGRRIALTHAGAQTATRTVFVPDTWPLRIGAFGPDGAPKN
GPALVQDIAGPCCFAGDVVAFGRELPELAGDDVVVLYDTGAYYFSTPWAYNSLPRPAVYG
FRAGQDGAVTFTTVRDAQSLDAIAAESGLAHADALVGADASPRPDAPGVRDG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacgacttccggacacgacgagcacggtacggcggcccccgcgacggccctc
agcacacgccacgacccccgattcgacgccgtcgtccgggcggccgtcgagcaggggctg
ctgggcgagggcggtgaggtcgccgggttcgtcgacacggaaggggtgcgcggctccgtc
gcggccctgcacgacgccttctccggcgcgcccggggtgctgcacaccttcgccgccaag
gcgtgctcgctcatcccggtgctgcggctgctcgccgactgcggcatgggatgcgaggtg
gcgagccccggcgagctgcgcctcgctctggacgcggggttcgccgcctcccgtatcgtc
ctcgactcccccgccaagacccgcgaggagctccggtcggcgctcgcgctcggggtctcc
gtcaacgccgacagcctggacgaactgcgccgtatcgacgccctgcgcgctccggactcc
gcgtccgtggtcgggctgcggatcaacccccaggtgggcggtggcgcgatcggggcgatg
agcacggcgacggacacctcgaagttcggggtggcgctgtgtgatccgggcgcgcgggag
gcgatcgtgcgggcgttccgggagcggccgtggctgacccgtctgcacgcccatgtgggc
tcccagggctgcccgttggagctgatcgcggccggggtgtcccggacgtacgaactggcc
gaggagatcaacgcggcgctgggcgtccgccaggtcaccggcctggacatcggcggcggc
ctttcggtcaacttcacggacgggaccgtacgccccacctacgcggactacgtggcggcc
ctgaccgccgccgtcccgggcctcctctccggacgctacgcgctgatcacggagttcggc
cggtccctgctggcgaagaacgggttcatcggggcccgcgtggagtacgtgaaggacgcc
gggggccggcggatcgccctcacccacgcgggcgcgcagaccgccacccgtacggtgttc
gtgcccgacacctggccgctgcggatcggggcgttcggcccggacggcgctcccaagaac
ggtccggcgctggtccaggacatcgcggggccgtgctgtttcgccggggacgtggtggcg
ttcggcagggagctgccggagctggccggggacgatgtggtggtcctgtacgacacgggg
gcgtactacttctccacgccgtgggcgtacaacagcctgccccgtcccgccgtgtacgga
ttccgggcggggcaggacggggcggtgacgttcacgacggtgcgggacgcgcagtcgctg
gacgccatcgccgcggaaagcggactcgcccacgcggacgcgctggtgggggccgacgcg
tcgccgcgcccggacgcgccgggggtacgggacggctga
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