KEGG   Streptomyces violaceoruber: B1H20_32400
Entry
B1H20_32400       CDS       T05124                                 
Name
(GenBank) endonuclease VIII
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
svu  Streptomyces violaceoruber
Pathway
svu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:svu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B1H20_32400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svu03400]
    B1H20_32400
Enzymes [BR:svu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     B1H20_32400
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     B1H20_32400
DNA repair and recombination proteins [BR:svu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     B1H20_32400
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Zn_ribbon_TFIIB Ribosomal_S13 NFACT_N DUF5795 Zn_ribbon_8
Other DBs
NCBI-ProteinID: ARF65598
UniProt: A0A1V0UKX5
LinkDB
Position
7448103..7448963
AA seq 286 aa
MPELPEVEALRVFLDDRLVGKEIARVLPLAISVLKTYDPPLSALDGTTVTSVARHGKFLD
IEAGGLHLCTHLARAGWLRWKDSFPAAPPRPGKGPLALRLVTTDGDGFDLTEMGTKKRLS
VHLVHDPMEVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLIAGIGNAYSD
EILHVAKMSPFKRTADLREDDVTRLYTALRTTLKDAVDRSSGVEAGKLKAEKKTGMRVHG
RAGEACPVCGDTVLEVSFSDSALQYCPTCQTGGKPLADRRLSKFLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcgaagccctgcgggtcttcctcgacgaccgcctggtcggc
aaggagatcgcccgcgtcctgccgctggcgatcagcgtcctcaagacgtacgacccgccg
ctgagcgccctggacggcacgaccgtcacctcggtcgcccggcacggcaagttcctcgac
atcgaggcgggcgggctgcacctctgcacgcacctcgcccgcgccggctggctgcgctgg
aaggactccttccccgccgccccgccgcgccccggcaaggggccgctcgccctgcgcctg
gtcaccaccgacggcgacggcttcgacctgacggagatgggcaccaagaagcgcctctcg
gtccacctcgtccacgaccccatggaggtcccgggcatcgcccggctcggcccggacccg
ctggccgacgccttcgaccgggacgcgttcgccgcgctgctcgccggggaacgccgccag
atcaagggcgcgctgcgggaccagtcgctgatcgcgggcatcggcaacgcctacagcgac
gagatcctgcacgtcgcgaagatgtccccgttcaaacggaccgccgacctccgcgaggac
gacgtcacccgcctgtacaccgcgctgcgcaccacgctcaaggacgccgtggaccgctcc
agcggagtggaggcgggcaaactgaaggccgagaagaagaccgggatgcgggtccacggg
cgggccggcgaggcgtgcccggtctgcggggacaccgtcctggaggtctccttcagcgac
tccgcgctccagtactgccccacctgccagaccggcggcaaaccgctggccgaccggagg
ctctccaagttcctgaagtga

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