Sciurus vulgaris (Eurasian red squirrel): 306640061
Help
Entry
306640061 CDS
T11892
Symbol
SART1, ACX6B4_002493
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
306640061 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svul03041
]
306640061 (SART1)
04121 Ubiquitin system [BR:
svul04121
]
306640061 (SART1)
Spliceosome [BR:
svul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
306640061 (SART1)
Ubiquitin system [BR:
svul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
306640061 (SART1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
306640061
NCBI-ProteinID:
XP_078960049
LinkDB
All DBs
Position
11:complement(7903873..7913669)
Genome browser
AA seq
842 aa
AA seq
DB search
MGSSKKHRGEKEAAGTTAAAGTGGSTEQPPRHREHKKHKHRSGGGGSSGGERRKRSRERG
GERGSGRRGAEAEARSSAHGRERSQAEPSERRVKREKRDDGYEAAASSKTSSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRLL
NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
FGQRRQDLYSARDLQGLTVEHAIDSFREGETVILTLKDKGVLQEEEDVLVNVNLVDKERA
EKNVELRKKKPDYLPYAEDESIDDLAQAWQQGGAQGGTIGPRVLRRWASWLIRSHRGPQP
APLALQQKPRSILAKYDEELEGERPHSFRLEQGGTADGLRERELEEIRAKLRLQAQSLSS
AGPRLASEYLTPEEMVTFKKTKRRVKKIRKKEKEVIVRADDLLPLGDQTQDGDFGSRLRG
RGRRRVPEVEEAAPEDEEKEPVPQLPQSDDTRVENMDISDEEDSGALPSGSPEVLEEDEA
ELELQKQLEKGRRLRQLQQLRDSGEKVVEIVKKLESRQRGWEEEEDPERKGAIVFNATSE
FCRTLGEIPTYGLAGNREEQEELMDFERDEERSANGGSESDGEENIGWSTVNLDEEKQQQ
DFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQKVARVKAPNKSLPSAVYCIEDK
MAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQLSHRFHGKGS
GKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMNANTI
TK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcaaagaagcaccgcggagagaaagaggcggccgggaccacggcggcggcc
ggcaccgggggctccaccgagcagccgccgcggcatcgggagcacaaaaagcacaagcac
cggagtggcggcggcggcagcagtggcggtgaacgacggaagcggagccgggagcgtggg
ggcgagcgcgggagcgggcggcgtggggccgaagccgaggcccgcagcagcgcgcacggg
cgggagcgcagccaggccgagccctcggagcggcgcgtgaagcgggagaagcgcgatgac
ggctacgaggccgctgccagctccaaaactagctcaggagatgcctcatcacttagcatc
gaggagaccaataaactccgggcgaagttggggctgaaacccttggaggtcaatgctgtc
aagaaagaggcgggcaccaaagaggagcccgtggcagccgatgtcatcaaccccatggcc
ttgcgacagcgagaagagctccgggagaagctagcagctgccaaggagaagcgcctactg
aatcagaagttggggaagataaagacactgggggaggatgacccctggctggacgatact
gcagcctggatcgagaggagccgacagctgcagaaggagaaggatttggcagagaagagg
gcaaaactgctggaggagatggaccaagagtttggtgtcagcactctggtagaagaggag
tttgggcagaggcggcaggatctgtacagtgcccgggacctgcagggccttactgtggaa
catgccattgattcctttcgagaaggggagactgtgatcctcactctcaaggacaaaggt
gtgctacaggaagaggaggatgtgctggtgaacgtgaacctggtagacaaggagcgggca
gagaagaacgtggagctgcggaagaagaagcccgactacctgccctacgcagaggacgag
agcattgacgacttggcacaggcatggcagcagggtggtgcacagggcgggaccattggg
cctagggtgctgaggagatgggcttcctggcttatcaggagccaccgtgggccccaacct
gcacctcttgctctgcagcaaaaacctcgctccatcttggccaagtatgatgaggagctg
gaaggcgagcggccgcactccttccgtttggagcagggcggcaccgctgatggcctgcgg
gagcgggagctggaagagatcagggccaagctgcggctgcaggctcagtccctgagctca
gcagggccccggctggcctcggagtacctcacacccgaggagatggtgacctttaaaaag
acgaagcggagggtgaagaaaatccgcaagaaggagaaggaggtgatagtgcgggcagat
gacctgctgcctctgggagatcagactcaagatggggactttggttccagactgaggggc
cggggtcggcgccgagtgcctgaagtggaggaggcagccccagaggacgaggagaaggag
cctgtgcctcagctcccgcagtcagacgacactcgtgtggagaacatggacatcagtgac
gaggaggacagtggagcgctgccatcagggtcaccagaggtgctggaggaggacgaggca
gagctggagctgcagaagcagctggagaaggggcgccggctgcggcagctgcagcagctg
cgggacagtggggagaaggtggtggagattgtgaagaagctggagtctcgccagcggggc
tgggaggaggaagaggatcctgagcggaagggggccatcgtgttcaacgccacctcggag
ttctgccgcaccctgggggagatccccacctatggtctggctggcaaccgggaggagcag
gaggaactcatggactttgaacgggatgaggagcgctccgccaatggcggctcggaatca
gatggagaggagaacattggctggagcaccgtcaacctggacgaggagaagcagcagcag
gatttctctgcctcctctaccaccatcctggacgaggagcccattgtgaacagaggactg
gctgccgccttgctgctctgccagaacaaagggctcctggagaccacagtgcagaaggtg
gcccgggtgaaggcccccaacaagtccctgccctcagccgtgtattgcattgaggacaag
atggccatcgatgacaagtacagccggcgggaggaataccgaggcttcacccaggacttc
aaggagaaggacggctacaagcctgatgttaagatcgagtatgtggatgagacaggccgg
aaactcacacctaaggaggctttccgccagctgtcccaccgcttccatgggaagggctcg
ggcaagatgaagacagagcgacggatgaagaagctggatgaggaggcgctcctgaagaag
atgagctccagtgacacgcccctgggcactgtggctttgctgcaggagaagcagaaggcc
cagaagactccgtatattgtgctcagtggcagcggaaaaagcatgaatgcgaacaccatc
accaagtga
DBGET
integrated database retrieval system
