Sciurus vulgaris (Eurasian red squirrel): 306641294
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Entry
306641294 CDS
T11892
Symbol
TNR, ACX6B4_003726
Name
(RefSeq) tenascin-R isoform 1
KO
K06252
tenascin
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04151
PI3K-Akt signaling pathway
svul04510
Focal adhesion
svul04512
ECM-receptor interaction
svul04518
Integrin signaling
svul05165
Human papillomavirus infection
svul05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
306641294 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
306641294 (TNR)
04518 Integrin signaling
306641294 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
306641294 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
306641294 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
306641294 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
svul00536
]
306641294 (TNR)
Glycosaminoglycan binding proteins [BR:
svul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
306641294 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
EGF_2
Fn3_PBP1
Fn3_VIN3
FN3_Tor_3rd
DUF7949
CBM_4_9
Uroplakin_II
SPE9_EGF_3rd
EGF
Motif
Other DBs
NCBI-GeneID:
306641294
NCBI-ProteinID:
XP_078962487
UniProt:
A0A8D2DGB8
LinkDB
All DBs
Position
12:105590761..105669746
Genome browser
AA seq
1358 aa
AA seq
DB search
MGADRETVVLKNMLIGVNLILLGSMLKPSECQLEVTTERVQSQALEEEGGLGNYSTSSKE
QPMVFNHVYNINVPLDSLCSSGLEASAEQEVSAEDETLAEYTGQTSDHESQVTFTHRINL
PKKACPCAGSAQVLQELLSRIEMLEREVSVLRDQCASNCCQESAATGQLDYIPHCSGHGN
FSLESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDNEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGTCANGTCLCQEGYVGEDCGQRLCLNA
CSGRGHCQEGLCVCEEGYRGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTARGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNIPSLPITAKVATHLSTPRG
LRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLRYGL
VGGEGGRTTFRLQPPLSQYSVQALRPGARYMVSVSAVRGANESTSTTTQFATEIDAPKNL
RVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHEVLVPKGIGPTTRATLTDLVPGT
EYGVGISAIMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEITVPKDRTSHTLTDLEPGAEYIISITAERGRQQSSESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLKGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTISRLNPATEYEISLNSVRGREESERICTLVHTAMDNPVDLI
ATNITPTEALLQWKAPAGDVENYVIVLTHFAGAGETILVDGVSEEFQLVDLLPSTHYTVT
MYATSGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYVLTYRSADG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDATRSSITSAAFTTGGRVFAHPQDCAQ
HLVNGDTLSGVYTIFLNGERSQKLPVYCDMSTDGGGWIVFQRRQNGQTDFFRKWADYRVG
FGSLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAYAYYDKFSVEDGRSLYKLRLGSY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRLTAGRKRRALRF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagatagggagacagtggtcctgaagaacatgctcattggtgtcaacctgatc
cttctgggctccatgctcaagccctcagagtgtcagctggaggtgaccacggaaagagtc
cagagtcaggcactggaggaggagggaggccttggcaactacagtacgtccagcaaagag
cagcccatggtcttcaaccacgtgtacaacatcaacgtgcccctggacagcctctgctcc
tcggggctagaggcctcggccgagcaggaggtgagtgcggaagacgagactctggcagag
tacacgggccagacctcggaccacgagagccaggtcaccttcacccacaggatcaacctc
cccaaaaaggcctgcccgtgtgcgggctcggcccaggtgctgcaggagctgctgagccgg
atcgagatgctggagagggaggtgtccgtgctgcgggaccagtgcgccagcaactgctgt
caagaaagcgcggccacaggacaactggactacattcctcactgcagtggccatggtaac
tttagcctggagtcctgcggctgcatctgcaacgaaggctggtttggcaagaactgctca
gagccctactgcccactgggctgctccagccggggcgtgtgcgtggacggccagtgcatc
tgcgacaacgagtacagcggggacgactgctccgagctccggtgccccacagactgcagc
tcccgggggctgtgcgtggacggggagtgcgtctgtgaagagccctacacaggcgaggac
tgccgggagctgaggtgcccgggcgactgctcggggaaggggacctgtgccaatggtacc
tgtttgtgccaggagggctacgtcggcgaggactgcggccagcggctttgtctgaatgcc
tgcagcgggcgagggcactgccaggaggggctgtgcgtctgtgaagagggctaccggggc
ccggactgctccgcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggcccgggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatccccagccttcccatcactgccaaggtggccacccatctctccactcctcgaggg
ctgcgattcaagaccatcacggagaccaccgtggaggtgcagtgggagcccttctccttc
tccttcgatgggtgggagatcagcttcatcccgaagaacaatgagggaggagtgattgcc
cagctcccaagtgatgtcacctcctttaaccagactggcctgaagcccggggaggaatac
attgtcaatgtggtggccctgaaggaacaagcccgcagccccccgacctcggccagcgtc
tccactgtcatcgacgggcccacgcagatcctggttcgcgatgtctctgacactgtggcc
tttgtggagtggaccccacctcgagctaaagtcgatttcattctcttgagatatggcttg
gtggggggtgaaggtgggaggaccaccttccggctgcagcctcccctcagccagtactcc
gtgcaagcactgcggcctggcgcccgctacatggtgtcggtcagcgccgtccgaggggcc
aacgagagcacgtccaccaccacccagtttgccacggagattgatgcccccaagaattta
cgagtcggttcccgcacggcaaccagccttgaccttgagtgggataacagcgaggcagaa
gttcaggagtacaaggttgtgtacagcacactggcgggggagcaataccatgaggtgctg
gtccccaagggcattggtccaaccaccagggccaccctcacagatctggtacccggcact
gagtatggagttggaatatctgccatcatgaactcacaacaaagcgtgccagccaccatg
aatgcgaggacggaacttgacagtccccgagacctcatggtgacagcctcctcagagacc
tccatctccctcatctggaccaaggccagtggccccattgaccactaccgaattaccttc
accccatcctctgggattgcctcagaaatcacggtacccaaggacagaacctcgcacaca
ctgacggatctggagcctggcgcagagtacatcatctccatcaccgccgagaggggtcgg
cagcagagctcggagtccacagtagatgccttcacaggcttccgccctatctcccatttg
cacttttctcacgtgacttcctctagtgtcaacatcacctggagtgacccatctccccca
gcagacagactcattctgaactatagcccccgggatgaagaggaagagatgatggaggtc
tccttggatgccaccaagagacatgctgtcctgaagggtctgcagccagccactgagtat
atcgtgaacctggtggctgtccatggcacagtgacctctgagcccatcgtgggctccata
accacaggaattgatcctcccaaagacatcacaattagcaatgtgaccaaggactcggtg
atggtctcctggagccctcctgttgcatcttttgattactaccgagtatcatatagacct
acccaagtaggacggctggacagttcagtggtgcccaacactgtgacagaattcaccatc
tccaggctgaacccagctaccgaatatgaaatcagcctcaacagtgtgcggggcagggag
gaaagcgagcgcatctgcactctggtgcacacagccatggataaccccgtggatctgatc
gccaccaacatcaccccgacggaagccctgctgcagtggaaggctccagcgggcgatgtg
gagaactacgtaattgtcctcacacacttcgcaggtgctggggagaccatcttggttgat
ggagtcagtgaggaattccagctcgtggacctacttcctagcacccactataccgtcacc
atgtacgccaccagtgggcctctcaccagcggtaccatcagcaccaacttctccaccctc
ctggaccctcccgcaaacctgactgccagtgaagtcaccagacagagcgcgctgatctcc
tggcagcctcccagggcggagatcgagaattatgtcctgacgtacagatccgccgatgga
agccgcaaggagctgattgtggatgcagaggacacctggatccggctggaggggctgtcg
gagagcacggactacacagtgctcctgcaggcggcccaggatgccacgaggagcagcatc
acctcggccgccttcaccacagggggccgagtattcgctcatcctcaagactgtgcccag
catttggtgaacggagacacgctcagtggcgtttacaccatcttcctcaatggggagcga
agccagaagttgccggtgtactgcgacatgagcaccgacgggggcggctggatcgtattc
cagaggagacagaatggccaaactgacttcttccggaagtgggctgactatcgcgtgggc
tttgggagcctggaggatgagttttggctggggctggacaatatacacaggatcacgtcc
cagggccgctacgagctacgtgtggatatgcgagatgggcaggaagcagcctacgcctac
tacgacaagttctcggtggaggacggcaggagcctgtacaagctccgcctaggaagctac
aacggcactgcaggagactccctcagctatcaccagggacgccccttctccacagaggat
cgagacaatgacgtggcagttaccaactgcgccatgtcgtacaagggagcttggtggtac
aagaactgccaccggaccaacctcaacgggaagtatggagagtccaggcacagtcagggg
ataaactggtaccattggaaaggccacgagttctccatccccttcgtggaaatgaagatg
cggccctacaaccaccgtctcacggcggggaggaaacggcgggccttacggttctga
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