Sciurus vulgaris (Eurasian red squirrel): 306641777
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Entry
306641777 CDS
T11892
Symbol
ACX6B4_004209
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svul03041
]
306641777 (ACX6B4_004209)
03009 Ribosome biogenesis [BR:
svul03009
]
306641777 (ACX6B4_004209)
Enzymes [BR:
svul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
306641777 (ACX6B4_004209)
Spliceosome [BR:
svul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
306641777 (ACX6B4_004209)
Ribosome biogenesis [BR:
svul03009
]
Eukaryotic type
90S particles
Helicases
306641777 (ACX6B4_004209)
Pre-60S particles
306641777 (ACX6B4_004209)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
306641777
NCBI-ProteinID:
XP_078963135
LinkDB
All DBs
Position
12:complement(42123168..42126485)
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AA seq
609 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQRASDVSLSETQNGDMPEKTLKVRKVKKSLKRS
VTVGLPEVQNGDKSEEIVENVKVKKSPQKSTILTNGEATTQSPNSETKKKKKKKKRKMVN
DAGPDAKKVKVEEGTEAHEETENSVEKPVDEEEDSEGPSLPLGLTGAFEDTSFASLTNLV
NENTLKAIKEMGFMNMTEIQHKSIRPLLEGRDLSSCKTGSGKTLAFLIPVIELIVKLKFM
PRNGTGALILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIIVA
TPGWLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSAIQ
TRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGRQKQNKRTTTFFQFCNADSGILLC
TDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYL
KQSKVPLNEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFDV
NNLNLPQVALSFGFKVPPFVDLNVNSSEGKRKKRGGGGGFGYQKTKKVEKSRIFKNISKK
SSDSRQFSH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacctgccgatgaaacttctgcgtaagaagattgagaagcggaacctcaaattg
aggcagcgaaacctaaagttgcaaagggcctcagatgtgagcctatcagaaactcaaaat
ggtgacatgcctgaaaaaacactgaaagtcagaaaagtaaaaaaatccctgaagcgttct
gtgactgtaggcttgccagaagtgcaaaatggagataagtctgaagaaatagtagaaaat
gtaaaagttaaaaaatccccccagaaatctaccatattaaccaatggagaagcaacaaca
cagtcccccaattcagaaacaaaaaagaaaaagaagaagaaaaagagaaaaatggtgaat
gatgctgggcctgatgcaaaaaaagtaaaagttgaagaaggcactgaagctcatgaagaa
acagaaaacagtgtggaaaagccagttgatgaggaagaagacagtgaaggacccagcctg
cccctgggactgacaggagcttttgaggatacttcatttgcttctctaactaatcttgtc
aatgaaaacactctgaaggcaataaaagaaatgggcttcatgaacatgactgaaattcaa
cataaaagtattaggccacttctggaaggcagggatcttagcagctgcaaaactggaagt
ggtaaaacccttgcatttctcatccctgtgattgaactcattgttaagttaaagttcatg
cccaggaacggaacaggagcccttattctctcacctactagagaattggccatgcagact
ttcggtgttcttaaggagctgatgactcaccacgttcacacatatgggttgatcatgggt
ggcagtaacagatctgctgaagcacagaaacttgctaatggtatcaacatcattgtggca
acaccaggctggctcctggaccatatgcagaataccccaggttttatgtataaaaaccta
caatgtctggttatcgatgaggctgatcgtatcttggatgttgggtttgaagaagaatta
aagcaaattattaaacttctgccaacacgcagacagaccatgctcttttctgccatacaa
actcggaaagttgaagacctggcacggatttctttgaaaaaggaaccattgtatgttggt
gttgatgatgataaagctaatgcaacagtggatggtcttgagcagggaaggcagaagcaa
aataagcgtaccaccacattcttccagttctgcaatgcagattcagggatattattgtgt
acagatgtggcagcaagagggttggatattcctgaagttgactggattgttcagtatgac
cctccagatgaccctaaggaatatattcatcgtgtgggtagaacagccagaggtctaaat
ggaagagggcatgccttgctcattttgcgcccagaagaattgggtttccttcgttacttg
aagcaatccaaggttccattaaatgaatttgacttttcctggtccaaaatttctgacatt
cagtctcagcttgaaaaattgattgaaaagaactactttcttcataagtcagcccaggaa
gcatacaagtcctacatacgagcatatgattctcattctctgaaacagatctttgatgtt
aataacttaaatttgcctcaggttgccctgtcatttggtttcaaggtgcctccttttgtt
gatttgaatgtgaacagcagtgagggcaagcgtaaaaagagaggaggcggcggtggattt
ggctatcagaaaaccaagaaagttgagaagtccagaatcttcaaaaatattagcaagaaa
tcatcggacagccggcagttctctcactaa
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