Sciurus vulgaris (Eurasian red squirrel): 306642016
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Entry
306642016 CDS
T11892
Symbol
VPS45, ACX6B4_004448
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform 1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
306642016 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svul04131
]
306642016 (VPS45)
Membrane trafficking [BR:
svul04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
306642016 (VPS45)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
306642016
NCBI-ProteinID:
XP_078963501
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All DBs
Position
1:111465389..111523886
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AA seq
570 aa
AA seq
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MNVVFAVKQYVSKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR
EIMKHLKAICFLRPTKENVDYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNVKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLIVDLRNKGVSEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKG
KLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNT
KSFLEEVLASGLHSRSKDSSQVPSRSASRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtttttgctgttaagcagtatgtttccaaaatgatagaggacagcgggccc
ggtatgaaagtacttctcatggataaagagacgactggcatagtgagtatggtatacaca
caatcagagattcttcagaaggaagtgtacctttttgaacgcattgattctcaaaatcga
gagatcatgaaacacctgaaggcaatttgttttcttcgacctacgaaggaaaatgtggat
tatctaattcaggagcttcgaagacccaaatacagtatatattttatttatttcagtaat
gtgatcagcaagagtgatgtgaagtcattagctgaagctgatgaacaggaagttgtggct
gaggttcaggaattttatggtgattacattgctgtgaatccacatttgttttccctcaat
attttgggttgctgtcagggtcgaaattgggatccagctcagctctccagaacaactcaa
ggactgacagctctccttttatctctgaaaaagtgtcccatgattcgttatcaactttca
tcagaggcagcaaagagacttgcagaatgtgtaaagcaagtaataactaaagaatatgag
ctgtttgaattccggcggacagaagttcctccattgctacttattttagatcgctgcgat
gatgccatcactccattgcttaaccagtggacatatcaggccatggttcatgaactacta
ggcataaacaacaatcggattgatctttccagagtgccggggattagtaaagacttaaga
gaggtggttctatctgctgaaaatgatgaattctatgctaataatatgtacctgaacttt
gcagagattggtagcaatataaagaacctcatggaagattttcagaagaagaaaccaaaa
gaacagcaaaaactagaatcaatagcagacatgaaggcctttgttgagaattatccacag
tttaagaagatgtctgggactgtatcaaagcatgtgacagtggtcggagaactgtctcgg
ttggtcagtgagcggaatctgctggaggtttcagaggttgagcaagaactggcctgtcaa
aatgaccattctagtgctcttcagaatgtaaagaggctcctacagaaccccaaagtgaca
gagtttgatgctgctcgcctggtgatgctctatgctctacactatgaacgacacagcagt
aacagcctgccaggactaatagtagatctcaggaataaaggtgtttctgagaagtatcga
aagctcgtgtctgccgttgtggaatatggtggtaaacgggttagaggaagtgatctcttt
agccccaaagatgctgtggctattaccaaacagttcctcaaaggattgaagggagtagaa
aatgtgtatacccagcatcagcctttcctacatgagaccctggaccatctcatcaaagga
aagcttaaagaaaacctctatccttatctaggccccagcacactcagagacagacctcag
gatatcattgtatttgtaattggaggagccacctatgaggaggctttaacagtttacaac
ctgaaccgtaccactcctggagtgaggattgtcctgggaggaaccacagtgcataataca
aaaagtttcctagaggaagttctggcttctggactgcacagccgaagcaaggacagctct
caagttccttccaggtcagcaagcaggagatga
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