Sciurus vulgaris (Eurasian red squirrel): 306642187
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Entry
306642187 CDS
T11892
Symbol
ACX6B4_004619
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svul03041
]
306642187 (ACX6B4_004619)
03009 Ribosome biogenesis [BR:
svul03009
]
306642187 (ACX6B4_004619)
Enzymes [BR:
svul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
306642187 (ACX6B4_004619)
Spliceosome [BR:
svul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
306642187 (ACX6B4_004619)
Ribosome biogenesis [BR:
svul03009
]
Eukaryotic type
90S particles
Helicases
306642187 (ACX6B4_004619)
Pre-60S particles
306642187 (ACX6B4_004619)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
306642187
NCBI-ProteinID:
XP_078963883
LinkDB
All DBs
Position
12:99258232..99260422
Genome browser
AA seq
593 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQRASDVSLSETQNGDMPEETLKVRKVKESLQRS
VTVGLPEVQNGDMSEEKVENIKVKKFLKHSVNVGLSEAQNGDKSEEIVENIKVKKSPQKS
TILTNSETKKKKKKKRKMVNDAGPDAKKVKVEEGTEAHEETENSVEKPVDEEEDSEGPSL
PLGLTGAFEDTSFASLTNLVNENTLKAIKEMGFTNMTEIQHRSIRPLLEGRDLLAAAKTG
SGKTLAFLIPKLKFMPRNRTGALILSPTRELAMQTFGVLKELMTHHIHTYGLIMGGSNRS
AEAQKLANCINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIK
LLPTRRQTMLFSATQTWKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKR
FLLLFIKKNRNKKLMVFFSSCKSVKYNYELLNYIDLPVFAIHGRQKQNKRTTTFFQFCNA
DSGILLCTDVAAKGLDIPEVDWIVQYDPPDDPKEYIHCVGRTARGLNGRGHALLILRPEE
LGFLRYLKQSKVPLNEFDFSWSKISESQLEKLIEKNYFLHKSAQEAYKSYIRA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacctgccgatgaaacttctgcgtaagaagattgagaagcggaacctcaaattg
aggcagcgaaacctaaagttgcaaagggcctcagatgtgagcctatcagaaactcaaaac
ggtgacatgcctgaagaaacactgaaagtcagaaaagttaaagaatccctgcagcgttct
gtgactgtgggcttgccagaagtgcaaaatggagatatgtctgaagaaaaagtggaaaat
atcaaagttaaaaaattcctgaagcattctgtgaatgtgggcttgtcagaagcacaaaat
ggagataagtctgaagaaatagtagaaaatataaaggttaaaaaatccccccagaaatct
accatattaaccaattcagaaacaaaaaagaaaaagaagaaaaagagaaaaatggtgaat
gatgctgggcctgatgcaaaaaaagtaaaagttgaagaaggcactgaagctcatgaagaa
acagaaaacagtgtggaaaagccagttgatgaggaagaagacagtgaaggacccagcctg
cccctgggactgacaggagcttttgaagatacttcatttgcttctctaactaatcttgtc
aatgaaaacactctgaaggcaataaaagaaatgggcttcacgaacatgactgaaattcaa
catagaagtattaggccacttctggaaggcagggatcttttggcagctgcaaaaacggga
agtggtaaaaccctcgcatttctcatccctaagttaaagttcatgcccaggaacagaaca
ggagcccttattctctcacctactagagaattggccatgcagactttcggtgttcttaag
gagctgatgactcaccacattcacacatatgggttgatcatgggtggcagtaacagatct
gctgaagcacagaaacttgctaattgtatcaacatcattgtggcaacaccaggccggctc
ctggaccatatgcagaataccccaggttttatgtataaaaacctacaatgtctggttatc
gatgaggctgatcgtatcttggatgttgggtttgaagaagaattaaagcaaattattaaa
cttctgccaacacgcagacagaccatgctcttttctgccacacaaacttggaaagttgaa
gacctggcaaggatttctttgaaaaaggaaccattgtatgttggtgttgatgatgataaa
gctaatgcaacagtggatggtcttgagcagggatatgttgtttgtccctctgaaaagaga
tttcttctgctctttattaagaagaatcgaaacaagaaactcatggtcttcttttcgtct
tgtaagtctgtaaaatacaactacgagttgctgaactacatcgatttacctgtcttcgcc
attcatggaaggcagaagcaaaataagcgtaccaccacattcttccagttctgcaatgca
gattcagggatattattgtgtacagatgtggcagcaaaagggttggatattcctgaagtt
gactggattgttcagtatgaccctccagatgaccctaaggaatatattcattgtgtgggt
agaacagccagaggtctaaatggaagagggcatgccttgctcattttgcgcccagaagaa
ttgggtttccttcgttacttgaagcaatccaaggttccattaaatgaatttgacttttcc
tggtccaaaatttctgagtctcagcttgaaaaattgattgaaaagaactactttcttcat
aagtcagcccaggaagcatacaagtcctacatacgagcatga
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