Sciurus vulgaris (Eurasian red squirrel): 306643269
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Entry
306643269 CDS
T11892
Symbol
TRAPPC8, ACX6B4_005701
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform 1
KO
K20305
trafficking protein particle complex subunit 8
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svul04131
]
306643269 (TRAPPC8)
Membrane trafficking [BR:
svul04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
306643269 (TRAPPC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
306643269
NCBI-ProteinID:
XP_078965439
LinkDB
All DBs
Position
13:complement(57798730..57884395)
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AA seq
1464 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSEEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHIIKNLKIAVSNIITQPPQPGAIRKLLNDVVSGSQPAEGLVANVITAGDYDLNISDRS
IKASVPWYSNWKDTLMELKESSLYTATTPWFESYRETFLQSMPASDHEFLNHYLACMLVA
SSNEVEPMEQFSKLSQEQHRIQHNNDYSYPKWFIPNTLKYYVLLHDISAGDEQRAESIYE
EMKQKYGTQGCYLLKINSRTSNRASDEQIPDPWSQYLQKSSIQNQESYEDGPCTITSNKN
SDSNLLSLDGLDNEVKVDGLPNNFRAHPLQLDQSSDPSNSIDGPDHVKSASSLHETKKAN
TGIIHGACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKK
WFSGSKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYDLAYSCYHTAKKDFL
NDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDICKNMVLAERCVLLSAE
ILKSQSKYSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKYAFHMILAGHRF
SKAGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSYTLRQLDNAVSAFRHILINE
SKQSAAQQGAFLREYLYVYKNVSQLSPDGPLPQLPLPYINSSATRVFFGHDRRPADGEKQ
AATHVSLDQEYDSESSQQWRELEEQVVAVVNKGIIPSSFHPTQYCLNSYSDNSRFPLAVV
EEPITVEVAFRNPLKVPLLLTDLSLLWKFQPKDFSGKDNEEVKELITGEPEMIGTEVISE
FLINSEESKVARLKLFPHHIGELHILGVVYNLGTIQGSLTVDGIGALPGCHTGKHSLSMS
VRGRQDLEIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFIHFPTGLLCGEIR
KAYVEFVNVSKCPLTGLKVVSKRPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDSTSV
CTALISSASSVDFGIGIGSQPEVISVPLPDTVLLPGASVQLPMWLRGPDEEGVHEINFLF
YYESVKKQPKIRHRILRHTAVICTSRSLNVRATVCRSNSLEDEEGRGGNMLVFVDVENTN
TSEAGVKEFHIVQVSSSSKHWKLQNSVNLAENKEAKLASREKGKFCFKAIRCKEKEGAMQ
SSERYTFADIIFGNEQIISSASPCADFFYRSLSSELKKPQAQLSLHTEKHSTEDALRLIK
KCSEVDLNIVILWKAYVVEDSKQLILEGQHHVILRTIGKEAFSYPQKQEPPEMELLKFFR
PENTAVSSRPSVDQLSNLIKTSLHYPESFNHPFHQKSLCLVPVTLLLSNCSKADVDVIVD
LRHKTTSPEALEIHGSFTWLGQTQYKLQLKSQEIHSLQLKACFVHTGVYNLGTPRVFAKL
SDQVTVFETSQQNSMPALIIINNV
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtacagtcagtgcaggagctaatcccggactccttcgttccttgtgtc
gccgcgctgtgcagcgaggaagcagagcggcttactcgtctcaatcatctcagcttcgcg
gagctgcttaagcccttttctcgcctcacttccgaggttcatatgagagatcctaataat
cagcttcacataattaaaaatttgaagatagcagtgagcaacattatcacccaaccacct
cagcctggagccattcggaagcttttgaatgatgttgtttctggcagtcagcctgcagaa
ggattagtagctaatgtgattacagcaggagattatgaccttaacatcagtgatcggtca
attaaagctagtgttccttggtacagtaattggaaagacacattgatggaattgaaagaa
tcctcgttatacacagctactactccgtggtttgagtcttatagagagacctttcttcag
tcgatgccagcgtcagatcatgaatttctgaaccactatttagcatgtatgttggtagca
tcatctaatgaagttgaacctatggaacagttttcaaaattgtcacaagagcagcatcga
attcagcacaacaatgattattcctaccctaagtggtttataccaaatacgcttaaatat
tatgtacttttacatgatataagcgcaggagatgaacagagagctgaatcaatttatgaa
gaaatgaaacagaaatatggaactcagggttgttatttgcttaaaattaattctcgaaca
tcaaatcgagcatcagatgaacagataccagatccttggagtcagtatctccagaaaagt
agtattcaaaaccaggaatcatatgaagatggcccttgtactataacttcaaataagaat
tcagatagtaacttgctttcattggatggattagataacgaagtcaaagtagatggctta
ccaaataactttagagctcacccacttcaattggaccaatccagtgacccttctaacagc
attgatggcccagatcatgtaaaatctgcctcgtcattacatgaaacaaagaaagcaaat
actggaataattcatggtgcatgtttaacacttaccgatcatgatagaattcgacaattt
atacaagagtttacatttcggggccttttgccacatatagagaaaacaattcggcaatta
aacgaccagctaatatcaagaaaaggtttgagtcgatctctattttctgcaactaaaaaa
tggtttagtggcagtaaagttccagaaaaaagcattaatgagctgaaaaatacatctggg
ttgctgtatccacctgaagcaccagaacttcaaatcaggaaaatggctgacttatgtttt
ttggtgcagcattatgatttagcttacagttgctatcatactgcaaagaaggattttctt
aatgatcaagcaatgctgtatgcagctggtgccttggaaatggcagcagtgtcagctttt
cttcaaccaggagcacccaggccataccctgctcattacatggatacagcaattcagaca
tacagggatatctgcaagaatatggtattggctgaaagatgtgtattgcttagtgctgaa
attctaaaaagccaaagcaaatattcagaggctgcagctctcctaatacggttgacaagt
gaggattctgatctccgaagtgcacttcttttggaacaggcagcacattgctttataaac
atgaagagtcccatggttagaaaatatgcatttcatatgatattggccggccatcggttt
agtaaagcaggacagaagaagcatgctttacgctgctattgtcaagccatgcaagtttac
aaaggaaaaggctggtctcttgcggaggatcacattaacttcactattggacgccagtcc
tatactcttaggcaactggacaatgctgtgtctgcttttaggcatattttaatcaatgaa
agtaaacagtctgctgctcaacaaggggccttccttagagagtatctttatgtttataag
aatgtaagtcagctatcaccagatggtcctttaccacagcttcctttaccatatattaac
agttcagcaacacgggttttctttggccatgacagacgaccagcagatggtgaaaagcaa
gcagctactcacgtaagtctggatcaagaatatgactctgaatcctctcagcagtggcga
gaacttgaagagcaagttgtggctgtggttaacaaaggaataattccatccagtttccat
cccacacaatattgtttgaacagttattcagataactccagatttccacttgctgttgtg
gaagaacccattacagtagaagtggcttttagaaaccctttgaaggttccacttctgttg
actgatttgtcattactctggaagtttcaacctaaagatttcagtggaaaggataatgaa
gaagttaaagaactaattacaggtgaacctgaaatgattggaactgaagttatttcagaa
ttcttaattaatagtgaagaatctaaagtggcgagactaaagctctttccccatcacata
ggggagctgcatattctgggagttgtttataatcttggcactattcagggctccttgaca
gtagatggcattggtgctcttcctggatgtcatacaggaaagcattccttgagtatgtca
gtccgagggagacaggatttagaaattcaaggtcctcgacttaacaacacaaaagaagaa
aaaacatctattaaatatggtcctgatcgacgtttagaccctataatcactgaagaaatg
ccactattggaggtgttctttatacattttcctacagggctcctctgtggagaaatcaga
aaagcatatgtagaatttgtcaatgtcagcaaatgtcctcttactggattgaaggttgtt
tctaaacgtccagaattctttacttttggtggtaatactgctgttctaacaccactgagc
ccctcagcttctgaaaattgtagtgcttacaagactgttgtgacagactctacctctgtg
tgtacagcactcatatcatcggcttcttctgtagactttggcattggtatagggagtcag
ccagaggtgatatctgttccccttcctgacactgttcttctacctggagcttcagtccag
ctaccaatgtggttacgtgggccagatgaagaaggtgttcatgaaattaactttttgttt
tactatgaaagtgttaaaaagcagcctaaaatacgacacagaatattaagacacactgca
gttatttgtaccagtcgatctttgaatgtgcgagctactgtctgcagaagtaattcttta
gaagatgaagaaggcagaggaggcaatatgctagtctttgtggatgtggaaaataccaat
actagtgaagcaggtgttaaggaattccacatagtccaagtatcaagtagtagcaagcac
tggaaattacagaactctgtaaatcttgctgaaaataaagaggccaaacttgccagtagg
gagaagggaaagttttgcttcaaagcaataagatgtaaggaaaaagaaggtgccatgcag
tcctcagaaaggtatacctttgcagatatcatctttggaaatgaacagataataagttca
gcaagcccatgtgcagatttcttttatcgaagtttatcctctgagttgaaaaaaccacaa
gctcagttgtctctgcatacagaaaagcattcaacagaggatgctctgagattgattaaa
aaatgcagcgaggtggatttgaatattgtcatattatggaaggcatatgttgtagaagac
agtaagcagctgattttggaaggtcagcatcatgtaattcttcgcactataggaaaagaa
gccttttcttatcctcagaaacaggaaccaccagaaatggaactgttaaaattcttcagg
ccagaaaacactgcagtttcctcaagaccatcagtggaccagctttctaatctcattaaa
acaagtcttcactacccagaatcattcaatcatccatttcatcaaaaaagcctttgttta
gtaccagtcactcttttactttctaactgttctaaggctgatgtagacgtgatagttgat
cttcggcataaaaccacaagtccagaagcattggaaattcatggatcattcacatggctt
ggacagacacaatataaacttcagcttaaaagccaggaaattcacagtttgcagctgaaa
gcttgctttgttcatacaggtgtttataatcttggaactcctagggtatttgccaagtta
tcggaccaagttacagtgtttgaaacaagtcagcagaactccatgcctgctctgatcatc
atcaataatgtgtga
DBGET
integrated database retrieval system
