Sciurus vulgaris (Eurasian red squirrel): 306643873
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Entry
306643873 CDS
T11892
Symbol
SPTBN1, ACX6B4_006305
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04517
IgSF CAM signaling
svul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
306643873 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
306643873 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
svul04812
]
306643873 (SPTBN1)
Cytoskeleton proteins [BR:
svul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
306643873 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
306643873 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
306643873
NCBI-ProteinID:
XP_078966297
LinkDB
All DBs
Position
14:complement(52706099..52887135)
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMITEEHFGSEKIRERIT
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDSLHEQASALPQEHAESPDVRGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGQLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEAESQQQWDTSKGEQVSQNGLPTEQGSPRMAETVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKSALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccaacagcagtacagcgac
gtcaacaaccgctgggacgtggatgactgggacaacgagaacagctctgcgcggctcttt
gaacggtcccgcatcaaggctctggcagatgagcgtgaagctgtgcaaaagaagaccttc
accaagtgggtcaattctcaccttgcccgagtgtcctgccggatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaggtcctctctggagagagactg
cctaaacccaccaaaggaagaatgcgcatccactgtctggagaatgtggacaaggccctt
cagttcctgaaagagcagagagttcatcttgagaacatggggtcccatgacattgtggat
gggaatcaccggctgacccttggcctcatctggaccatcatccttcgcttccagatccag
gacatcagtgtggaaacagaagataacaaagagaagaagtctgccaaggatgccttgcta
ttatggtgccagatgaagacagctgggtaccccaatgtcaacattcacaatttcaccact
agctggagagatggcatggccttcaatgcactgatacacaaacacagacctgatctgata
gattttgataaactgaagaaatccaatgcacactacaatctgcagaatgcatttaacctg
gcagagcagcatcttggcctcactaaactgttggaccctgaagacatcagtgtggaccac
cctgatgagaaatccattatcacttacgtggtgacttattaccactacttctctaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgaaaaatatgaatcacttgcctctgaccttctggagtggattgaacaa
accatcattattctgaacaatcgcaaatttgccaattcactggttggggttcaacagcag
cttcaggcattcaatacttaccgcactgtggagaaaccacccaaatttactgagaagggg
aacttggaagtgctgcttttcactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccccgagaggggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagagagaactggctctgcggaacgagctcataagacaggagaaactg
gaacagcttgcccgcagatttgatcgcaaggcagctatgagggagacttggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcctgccgttgaggctgcc
acaaaaaagcatgaggccattgagacagacattgctgcctatgaggagcgtgtgcaggct
gtggtggctgtggccagggagctcgaggcagagaactaccatgacatcaaacgcatcaca
gcaaggaaggacaatgtcatccggctctgggaatacctgctggaactgctcagggctcgg
agacagcgtctcgagatgaacctagggctacagaagatattccaggaaatgctctacatt
atggactggatggatgagatgaaggtgctattattgtctcaagactacggcaaacaccta
ctcggcgtggaagacctgttacagaaacatgctctggttgaagcagacattggaatccag
gcagagcgtgtgagaggcgtcaatgcttccgcccagaagtttgcaacagatggggaaggc
tacaagccctgcgacccccaggtgatccgagaccgtgtggcccacatggaattctgctat
caagagctttgccagctggcggcggagcgccgagcccgtctcgaggagtcccgtcgcctc
tggaagttcttttgggaaatggcagaagaggaaggctggatacgggaaaaggagaagatt
ctgtcctctgatgattatgggaaggatttgaccagtgtcatgcgcctgctcagcaagcac
cgggcattcgaggatgagatgagtggccgtagtggccacttcgagcaggccatcaaggaa
ggtgaagacatgatcacagaggaacacttcggatcagaaaagatccgtgagaggatcact
tacattcgggagcagtgggccaatctggagcaactctcagccattcggaagaagcgcctg
gaagaggcttcgctgctgcaccagtttcaggcggatgctgatgacattgacgcctggatg
ctggacatcctcaagattgtctccagcagcgacgtgggccacgatgagtactccacacag
tctttggtcaaaaaacacaaggatgtggcagaagagatcaccaactacaggcccaccatt
gactcactgcatgagcaagccagcgccctcccccaggagcatgcagagtctccagatgtg
aggggcaggctgtcaggcattgaggagcggtacaaggaggtggcagagctgacaaggctg
aggaagcaggcgctgcaagataccctggccctgtacaagatgttcagtgaggctgacgcc
tgtgagctctggattgatgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcatagatttgagagcctagaaccagaaatgaacaac
caggcctcccgggttgccgtggtgaaccagattgcacgccagctgatgcacagtggccac
cccagtgagaaagaaatcaaagcccagcaggacaagctcaacacaaggtggagtcagttc
agagaactggtggacaggaagaaagatgctcttctctctgccctgagcatccagaactac
caccttgagtgcaatgaaaccaaatcttggattcgggaaaagaccaaagttattgagtct
acgcaggacctgggcaatgacctggctggtgtcatggccttgcagcgcaagctgactggc
atggagcgggatctggtggccattgaggcgaagctgagtgacctgcagaaggaagcagag
aaactggagtctgaacaccctgaccaggctcaagccatcctgtcccggctggctgagatc
agcgacgtgtgggaggaaatgaagaccaccctgaagaacagagaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacttggacgacttccagtcctggctctccagg
acacagacagccatcgcctcggaggacatgcccaacaccctgaccgaggcagagaagctt
ctcacgcagcacgaaaacatcaaaaacgagattgacaactacgaggaggactaccagaag
atgagggacatgggtgagatggtcacacagggacaaacagatgcccagtacatgtttctc
cggcagcgactacaggccttggacactggatggaatgagctccacaaaatgtgggagaac
aggcagaatctcctctctcagtctcatgcctaccagcagttccttagggacacaaagcaa
gctgaagcctttcttaacaaccaggagtatgttttggctcatactgaaatgcccaccacc
ctggaaggtgctgaagcagctattaagaaacaagaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgttgtggagacgggccggaggctggtgagcgatgggaac
atcaactccgatcgcatccaggagaaggtggactctattgatgacagacataggaagaat
cgtgaggcagccagtgaactcctgatgagattaaaggacaacagggatcttcagaaattc
ctgcaagattgtcaagagctgtccctgtggatcaatgaaaagatgctcacagcccaggac
atgtcctatgatgaagccaggaatctgcacagtaaatggctaaaacatcaagccttcatg
gcggaacttgcatccaacaaagaatggcttgacaagattgagaaggaaggaatgcagctt
atatcagaaaagcctgagactgaagctgtggtaaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaactttttacccagagctgtgcagatctagacaagtggctgcatggcctggag
agtcagattcaatctgatgactatggcaaagaccttaccagtgtcaatatcctgctgaaa
aagcaacagatgctggaaaatcagatggaggtgcggaagaaggagattgaggaactccag
agccaagcccaggcactaagtcaggaggggaagagcactgatgaagtggatagcaagcgt
ctcactgtacagaccaagttcatggagctgttggaacccttgaatgaaaggaaacataac
ctcctggcctccaaagagatccatcaattcaaccgggatgtggaggatgagatcttgtgg
gttggtgagaggatgcctttggcgacttccacagatcatggccacaaccttcagactgtg
cagctgttaataaagaaaaatcagaccctccagaaagaaatccaggggcaccagcctcga
atcgatgacatctttgagaggagccaaaacatagtcactgacagcagcagcctcaatgct
gaggccatcagacagaggcttgctgacctgaagcagctgtggggccaacttatagaggag
acggagaaacggcacaggcggctggaggaggcgcataaggcccagcagtactattttgat
gcagctgaggctgaggcgtggatgagcgagcaggagctatacatgatgtctgaggaaaag
gccaaggatgagcagagtgctgtctccatgttgaagaagcaccaaatcttggaacaagct
gttgaggactatgcagagacagtacaccaactctccaagaccagtcgggccttggtggcc
gacagccaccctgaaagtgagcgcattagcatgcggcagtccaaagtggataagctgtat
gctggcctgaaggacctggcagaggagaggagaggcaagctggacgaaaggcacaggttg
ttccagctcaaccgggaggtggacgacctggagcagtggatcgccgagagggaggtggtt
gcagggtcccatgaactggggcaagactatgagcatgtcacaatgttacaagaacgattc
cgggaatttgctcgagacactggaaacattgggcaggagcgcgtggacacagtcaatcac
atggctgatgaactcatcaactctggacattcggatgctgccaccattgctgagtggaag
gacggcctcaatgaagcctgggctgacctcctggagctcattgacacaaggacacagatt
cttgctgcctcctatgaactgcataagttttaccatgatgccaaggaaatctttgggcgc
atccaggataaacataagaaactccctgaggaacttgggagagatcagaacactgtggag
accttgcagagaatgcacaccacctttgagcatgatatccaggctctgggcactcaggtg
aggcagctgcaagaggacgcagcccgcctccaggcagcttatgcaggggacaaggccgat
gacatccagaagcgcgagaacgaggtcctggaagcctggaagtccctgctagatgcctgc
gagggccgcagggtacggctggtggacacaggggacaaattccgctttttcagcatggtg
cgtgacctcatgctctggatggaggatgtcatccggcagattgaggcccaggagaagcca
agggatgtatcatctgttgaactattaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgtaatgacagtttcaccacctgcattgaattggggaaatccctgcttgcaaga
aaacactacgcttctgaggagatcaaggaaaagttactgcagttgactgaaaaaagaaaa
gaaatgattgacaagtgggaagaccgatgggagtggttaagactgattttggaggtccat
cagttctcaagggatgccagcgtggctgaggcctggctgctggggcaggagccataccta
tccagtcgcgaaatcggccagagcgtggatgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagcaacctgggatgagaggttctccgccctggagaggctgaca
acattggaattactggaagtgcgcagacagcaagaggaagaggaaaggaagaggcgacca
ccttcgcccgagccgagcacgaaggtttcagaggaggcagagtcccagcagcagtgggat
acttcaaaaggagagcaagtttcccagaatggtttgccgactgaacagggatctccacgg
atggcagaaaccgtggacacgagcgaaatggtcaatggcgctgcagagcagaggacgagc
tcaaaggagtccagccccatcccctccccaacctctgaccgcaaagccaagtctgccctc
ccagcccagagtgccgccaccctaccagccagaacccaggagacgccctcagcccagatg
gaaggtttcctgaaccggaagcacgagtgggaggcccacaataagaaagcctccagcagg
tcctggcacaatgtttattgtgtcataaataaccaagaaatgggtttctataaagatgca
aagaccgctgcttctggaatcccatatcacagtgaggtccctgtgagtttgaaagaagcc
atctgtgaagtggcccttgattacaaaaagaagaaacacgtgttcaagctcagactaaat
gacggcaatgagtacctcttccaagccaaagacgatgaggaaatgaacacgtggatccag
gccatctcctccgccatctcctctgataaacacgacctgtctgccagcacccagagcacg
ccagcatccagccgggcacagaccttacccaccagcgttgtcaccatcaccagcgagtcc
agccccggcaagcgggagaaggacaaagagaaagacaaagagaagcggttcagccttttt
ggcaaaaagaaatga
DBGET
integrated database retrieval system
