Sciurus vulgaris (Eurasian red squirrel): 306644178
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Entry
306644178 CDS
T11892
Symbol
TIA1, ACX6B4_006610
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
svul
Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svul03019
]
306644178 (TIA1)
03041 Spliceosome [BR:
svul03041
]
306644178 (TIA1)
Messenger RNA biogenesis [BR:
svul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
306644178 (TIA1)
Spliceosome [BR:
svul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
306644178 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
Calcipressin
DUF8400
Motif
Other DBs
NCBI-GeneID:
306644178
NCBI-ProteinID:
XP_078966984
LinkDB
All DBs
Position
14:complement(26356557..26388520)
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AA seq
388 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRH
AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT
TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR
TNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG
QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQN
QIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNY
GVQPPQGQNGSMLPNQPAGYRVAGYETQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagactctatacgtcggtaacctttccagagatgtaacggaa
gctctgattctccaactctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatgtaaggacagctggaaatgatccgtattgttttgtggagtttcatgagcatcgtcat
gcagctgcagcactggctgctatgaatgggcggaagataatgggtaaggaagtcaaagtg
aattgggcaactactcccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagc
acacagcgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattaca
actgaagatataaaagcagcttttgcgccatttggaagaatatcagatgcccgagtggta
aaagacatggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatgg
gatgctgaaaacgctattcaacagatgggtggccaatggcttggtggaagacaaatcaga
actaactgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacactaaa
cagctatcatatgatgaggttgtaaatcagtctagtccaagcaactgtactgtctactgt
ggaggtgttacttctgggctaacagaacaactaatgcgtcagactttttcaccatttgga
caaataatggaaattcgagtctttccagataaaggatactcatttgtgaggtttaattcc
catgaaagtgcagcacatgccattgtttctgttaatggtactaccattgaaggtcatgtt
gtgaaatgctattggggcaaagaaactcttgatatgataaatcctgtgcaacagcagaat
caaattggatatccacaagcttatggccagtggggccagtggtacggaaatgcacaacag
attggccaatatatgcctaatggatggcaagtacctgcatatggaatgtatggccaggca
tggaaccagcagggatttaatcagacgcagtcttctgcaccttggatgggaccaaattac
ggagtacagccgcctcaaggacagaatggcagcatgttgcctaatcagccagcggggtat
cgagtggcagggtatgaaacccagtga
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