Sciurus vulgaris (Eurasian red squirrel): 306645998
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Entry
306645998 CDS
T11892
Symbol
NR1D2, ACX6B4_008430
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2 isoform 1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
306645998 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svul03000
]
306645998 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
svul03310
]
306645998 (NR1D2)
Transcription factors [BR:
svul03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
306645998 (NR1D2)
Nuclear receptors [BR:
svul03310
]
1. Thyroid hormone like
1D. Rev-Erb
306645998 (NR1D2)
SSDB
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
306645998
NCBI-ProteinID:
XP_078970405
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All DBs
Position
16:complement(39915442..39946670)
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AA seq
578 aa
AA seq
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MEVNAGGVIAYISSSSSASSPASCHSEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDL
SNIEGILKNDRIDCSIKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHAC
EGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIP
KREKQRMLIEMQSAMKTMMNSQFSGHLQNDTLVEHHEQTALPAQEQLRPKPQMEQENIKS
SPPPSSDFAKEEVIGMVTRAHKDTFMYNQEQRESSAESMQPQRERIPKNMEQYNLNHDHC
GNGLNSHFPCSESQQHLNGQYKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPID
GFSQNENKNSYLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAK
RIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGD
LLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIM
KNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatgcgggaggcgtgatcgcctatatcagttcttccagctcggcctctagc
cctgcctcttgtcacagtgagggttctgagaatagcttccagtcctcctcctcttctgtt
ccatcttctccaaatagctccaattctgataccaatggtaatcccaagaatggtgatctc
tccaatattgaaggcatcctgaagaatgatcgaatagattgttctataaaaacaagcaaa
tcaagtgctcctgggatgacaaagagtcatagtggtgtgacaaagtttagtggcatggtt
ctactgtgtaaagtctgtggggatgtggcgtcaggattccactatggagttcatgcttgt
gaaggctgtaagggtttctttcggagaagtattcagcaaaacatccaatacaagaagtgc
ctgaagaatgaaaactgctctataatgagaatgaataggaacagatgtcagcagtgtcgc
ttcaaaaagtgtctgtctgtgggaatgtcgagagatgctgttcggtttggtcgtattcct
aagcgcgaaaaacagaggatgctcattgaaatgcaaagtgcgatgaagaccatgatgaac
agccagttcagtggtcacttgcagaatgacacattagtagaacatcatgaacagacagct
ttaccagcccaggaacagctgcgacccaagccccaaatggagcaagaaaacatcaaaagc
tctcctcctccctcttctgactttgcaaaggaagaagtgattggcatggtgaccagagcc
cacaaggatacctttatgtataatcaagagcagcgagaaagctcggctgagagcatgcag
ccccagagagaacggattcccaagaacatggagcagtataatttaaatcacgaccattgt
ggcaatgggcttaacagccattttccttgtagtgagagccagcagcatctcaatggacag
tacaaagggaggaacataatgcattacccaaatgggcatgccatttgtattgcaaatgga
cattgtatgaacttctccaatgcttatactcaaagagtatgtgatagagttccaatagat
ggattttctcagaatgagaacaagaatagttacctgtgcaacactggagggaggatgcat
ctggtttgtccaatgagtaagtctccatatgtggatccacataaatcagggcatgaaatc
tgggaagaattttccatgagcttcactccagcagtgaaagaagtggtggaatttgcaaag
cgtattccgggatttagagatctctctcagcatgaccaggtcaaccttttaaaagctgga
acttttgaggttttaatggtacggtttgcatcattatttgatgcaaaggagcgtactgtc
accttcttaagtggaaagaagtatagtgtggatgatttacactcaatgggagcaggggat
ctgctaaactccatgtttgaatttagtgagaagctaaatgccctgcagcttagtgatgaa
gagatgagtttgtttaccgcagttgtcctagtgtctgcagatcgatctggaatagaaaac
gtcaactctgtggaggctttgcaggaaaccctcattcgtgcactaaggaccttaataatg
aaaaaccatccaaacgaggcctctatttttacaaaactacttctaaagttgccagatctt
cgatctttaaacaacatgcactctgaggagctcttggcctttaaagttcatccttaa
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