Sciurus vulgaris (Eurasian red squirrel): 306646156
Help
Entry
306646156 CDS
T11892
Symbol
WDTC1, ACX6B4_008588
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
svul
Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svul04121
]
306646156 (WDTC1)
Ubiquitin system [BR:
svul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
306646156 (WDTC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
DSE1_N
ANAPC4_WD40
TPR_1
WD40_RFWD3
PAC11
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR41
TPR_11
TPR_2
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
ASA1
NBCH_WD40
TPR_BSK1_C
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_VPS8
TPR_14
TPR_19
TPR_17
Motif
Other DBs
NCBI-GeneID:
306646156
NCBI-ProteinID:
XP_078970736
LinkDB
All DBs
Position
1:19409734..19471647
Genome browser
AA seq
675 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTSYCSRNATHQGVIQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHISPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCPKAHFRLARCLWLKYVAEALECLDDFKGKFPEQAHSSCDALGRDITAAL
FSKNDGEEKKGAGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIKE
ANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDP
VVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSGGAGAS
DDEDSSEGQVQCRPS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacataactagggacctcatccgtaggcagatcaaggagcggggtgcc
ctgagctttgaacggcgctaccatgtcactgacccctttatccggagactaggcctggaa
gcagagctgcagggtcactcaggatgtgtcaactgtctggagtggaatgagaaaggagac
ttgctggcctctggttccgacgaccagcacacaattgtgtgggacccgctgcaccacaag
aagctgctctccatgcacacaggacacactgcaaatatcttctctgtcaagttcctgcct
catgctggggaccgcatcttgatcacgggagcagctgactccaaggtgcatgtccacgac
ctgactgtaaaggagactatccacatgtttggagaccacacaaaccgggtgaagcgcatc
gccacagcacccatgtggcccaacacgttctggagtgctgctgaggatgggcttatccgc
cagtacgaccttcgggaaaacagcaaacactcagaggtgctgattgacctgacagagtac
tgtggccagctggtggaagccaagtgcctcacagtcaatccccaggacaacaactgcctg
gcagtaggggccagtgggcccttcgtgaggctctacgacattcgcatgatccataaccat
agaaagagcatgaagcagagcccatcagcaggtgtacacaccttctgtgatcggcagaag
ccccttcctgatggtgcagcccagtattacgtagcaggtcacctgccagtgaagctgcct
gattataacaaccgtcttagagtgctggttgccacctatgtgacctttagccccaatggc
acggagctgctagtcaacatgggaggggaacaggtctatttgtttgacttgacttacaag
cagcggccatacacttcctattgctctagaaatgccactcatcagggggtaatccagaac
ggcaagatgtctaccaatggtgtgtccaacggtgtgtctaatggcctgcaccttcacagc
aacggcttccgactgccagagagtagggggcatatcagcccccaggtggagctgccccca
tacctggagcgcgtgaagcagcaagccaatgaggcttttgcctgccagcagtggacccag
gccattcagctttacagcaaggctgtgcagagggcccctcacaatgctatgctctatggt
aaccgagctgctgcctacatgaagcgcaagtgggacggtgaccactatgatgccctgagg
gactgcctgaaggccatctccctaaacccatgcccgaaggcacacttccgcctggcccgc
tgcctctggctcaagtatgtggctgaggccctggagtgcctggacgacttcaaagggaag
ttcccggagcaggcccatagcagctgtgatgcattgggccgcgacatcacagccgccctc
ttctccaaaaatgatggtgaagagaagaagggagctggtggtggtggaggcccagtccgc
ctccgaagcacaagccgcaaggactccatctcagaagatgagatggtactgcgggagcga
agctatgactatcagttccgctactgtggccactgcaacaccacaacagatatcaaggag
gccaatttctttggcagcaacgctcagtacatcgtcagtggctctgacgatggctccttc
ttcatctgggaaaaggagaccaccaacctagtgcgcgtgctccagggggatgagtccatc
gtcaattgcctgcagccacatcccagctactgcttcctggccaccagtggcatcgatcct
gtcgtgcgactctggaacccccgaccagagagtgaggacctcactggccgagttgtggaa
gacatggagggtgcttctcaggccaaccagcggcgcatgaatgcggaccccttggaggtg
atgctgctcaacatgggctaccggatcacaggcctgagcagcgggggcgccggggcctct
gatgatgaggacagctctgagggtcaggtgcaatgccggcccagctag
DBGET
integrated database retrieval system
