Sciurus vulgaris (Eurasian red squirrel): 306646868
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Entry
306646868 CDS
T11892
Symbol
SCN10A, ACX6B4_009300
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svul04040
]
306646868 (SCN10A)
Ion channels [BR:
svul04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
306646868 (SCN10A)
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
GPHH
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
306646868
NCBI-ProteinID:
XP_078971756
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All DBs
Position
16:<26704980..26799356
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AA seq
1962 aa
AA seq
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MEFPLGSLETTNFRRFTPESLVEIEKQIAAHQAGKKVREKHREKKDQEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWIFSPFNLIR
RTAIKMSVHSWFTLFITVTILVNCVCMTRTDLPEKIEYIFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYLCAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIH
SVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNDTSPDEASNYSSHRTNLSYVIK
SGTSDPLLCGNGSDAGHCPVGSICLKTSENPDFNYTSFDSFAWAFLSLFRLMTQDSWERL
YQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKFQEA
LEMLRKEQEVLTALGIDTASLHSHDGSPLPSKNASERRHRIKPKVSEGSTDDNRSPQSEP
YNQRRMSFLGLTSGRRRASHGSMFHFRAPGRDVSFPDGITDDGVFQGDHESRRGSLLLNK
VVGQQGPLPQPPSLGSGHGEEGYSMLPTSELVPGTTEVPVFDAGQKKTFLSAEYLNEPFR
VQRAMSVVSIMTSVIEELEDSQQRCPPCLTSLAQKYLIWECCPTWVKLKTALFGLVTDPF
AELTITLCIVVNTVFMAMEHHGMSTAFETMLHVGNIVFTIFFTAEMVFKIIAFDPYYYFQ
KRWNIFDCVIVTVSLLELSVAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGA
LGNLTIILAIIVFIFALVGKQLLGDDYRDHRNVIAVPGEEWPRWHMHDFFHSFLIVFRIL
CGEWIENMWACMEVSQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAPEDDGE
VNNLQVALARIQVFSRRTKQALRSFFSRPCLLPWPKAEPQLWMKPSISISKAENHIAANA
AAAGSPGGLPGLRDPREEHGDFITNPNVWVSVPIAEGESDLDDLEDDGEQDAQSSCQEVP
PKVQQEQLQQAGRCEDHLAPTSPGSGTSSEALTPYLGEQRKDTAAPQVPAEEVDDTSSSE
GSTVDCPDPEEMLRKIPELADDLEEPEDCFTEGCIQHCPCCKVNATKFPWAVGWQLRKTC
FRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPKVKALLEYTDRVFTFIFVFEMLLKW
VAYGFKKYFTNAWCWLDFLIVNISLTSLVAKILEYSDMASIKALRTLRALRPLRALSRFE
GMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINNTNEDFSLVHWSI
VDNISDCKNQNYTGNLFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSREVNSQ
PKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPLNRYQGFIFDVVTRQAFDIAIMVLICLNMITMMVETDEQSEEKT
KILGKINQFFVAVFAGECVLKMFALRHYYFTNGWNVFDFIVVILSIGSLVFSAILTSLEN
YFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFG
MASFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNG
NGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDFDMFY
ETWEKFDPEATQFINFSALSDFADTLSGPLRIPKPNQNILIQMDMPLVPGDKIHCLDILF
AFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQKAYRSY
VLYRSLTLSNPSRVPRTEEEAVSHLDEGFVAFMTNENCVLPDKSETASATSFPPSYDSVT
RGLSDRVNMSTSSSMQNENEATSKEVTAPDPSENTPAGHVQL
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccttggggtccctggaaactaccaacttccgtcggttcactccagagtcg
ctggtggagattgagaagcaaattgctgcccatcaggcaggaaagaaagtcagagaaaag
catagagagaagaaggaccaagaagagaagccacggccccagctggacttgaaagcctgc
aaccagctgcccaagttctatggtgagctcccagcagaactggtcggggagcccctggag
gatctagaccccttctacagcacacaccggacatttatggtgctgaacaaaggcaggacc
atttccaggtttagtgccactcgggccctgtggatattcagtcccttcaacctgatcaga
agaacggccatcaaaatgtctgtccattcgtggttcactttatttatcacggtcaccata
ttggtcaattgtgtgtgcatgacccgaaccgaccttccagagaaaatcgagtacatcttc
actgtcatttatacctttgaagctttgatcaagatactggcaagaggattttgtctaaat
gagttcacgtacctgagagatccttggaactggctggactttagcgtcattaccctggca
tatttgtgcgcaatagatctccgaggaatctctggcctgaggacattccgcgttcttaga
gctttaaaaacagtttctgtgatcccagggctgaaggtcattgtgggggccctgatccac
tccgtgaggaagctggctgatgtgaccatccttactgtcttctgcctgagtgtctttgcc
ctggtgggtctgcagctcttcaagggcaacctcaagaacaagtgcgtcaagaatgacaca
tctcctgatgaggcctctaactattcatctcacagaacaaatttatcatatgttattaag
tcaggcacttctgatcccttactgtgtggcaatggatctgatgcaggccactgccctgtt
ggttctatctgccttaaaacttctgaaaacccagattttaactacaccagctttgattcc
tttgcttgggctttcctctcactgtttcgcctcatgacacaggattcctgggaacggctc
taccagcagaccctcagagcttctgggaaaatgtatatggtcttttttgtgctggtcatc
ttcctgggatctttctacctagtcaacttgatcttggctgtggtcaccatggcatatgaa
gaacagaaccaggcgacaattgctgaaattgaagcaaaggagaagaagtttcaggaggcc
cttgagatgctccggaaggagcaggaggtgctgacagcactgggcattgacacagcctct
ctccattcccacgacggatcacctttgccttccaaaaatgccagtgagagaaggcacaga
ataaaaccaaaagtgtcagagggctccacggatgacaacagatcaccccaatctgagcct
tacaaccagcgcaggatgtctttcctaggccttacttctggaagacgtcgggctagccac
ggcagtatgtttcatttccgagcccctggccgagacgtctcattccctgatgggatcaca
gatgatggagtctttcaaggagaccatgagagccgtcggggctccctgctgctgaacaag
gttgttggacagcaaggcccactgcctcaaccccccagccttggctctgggcatggagaa
gagggatactcaatgctgcccactagtgagcttgtccctggaaccaccgaagtcccggtg
tttgatgcagggcagaagaagactttcttgtcagcagaatacttgaatgaacctttcaga
gtccaaagagcaatgagtgttgtcagtatcatgacctccgtcatcgaggaactggaggat
tctcaacagcgatgcccaccctgcttgaccagtttggctcagaagtatctgatctgggag
tgctgcccgacctgggtgaagctcaagacagctctctttgggctggtgacggaccccttt
gcagaactcaccatcaccctgtgcatcgtggtgaacaccgtcttcatggccatggagcac
catggcatgagcactgccttcgaaaccatgctccacgtaggcaacatcgtctttaccata
ttttttactgctgaaatggtcttcaaaatcattgccttcgacccctactactacttccag
aagaggtggaatatcttcgactgtgtcattgttaccgtgagcctgctggagctgagcgtg
gccaagaagggaagcttgtctgtgctgcggactttccgcttgctgcgggtcttcaagctg
gccaagtcctggccaaccttaaacacactcatcaagatcatcgggaactccgtgggagcg
ctggggaacctgaccatcatcctcgccatcattgtcttcatcttcgctctggtgggcaag
cagctcctgggggatgactaccgggaccaccggaatgttatcgctgtgccaggtgaagag
tggcctcgctggcacatgcacgacttcttccattccttcctcatcgtcttccggatcctt
tgtggagagtggatcgagaacatgtgggcctgcatggaagtcagccagaaatccatatgc
ctcatcctcttcttgacggtcatggtgctggggaaccttgtggtgctcaacctgttcatc
gccctgctgctgaactctttcagtgccgacaacctcactgctccagaggatgatggggaa
gtgaacaacctacaggtggccctggcacgaatccaggtgttcagccgacgcaccaagcag
gcgcttcgcagcttcttcagcaggccctgcctgctcccctggcccaaggcggagccccag
ctgtggatgaaaccctccatctccatctccaaagccgagaaccacattgctgccaatgcg
gctgctgcggggagccctggaggactgccaggtctcagggaccccagggaggaacacggc
gacttcatcaccaatcctaacgtgtgggtctctgtgcccattgctgagggcgaatctgat
ctcgatgacttggaggatgatggtgagcaggatgctcagagctcctgtcaggaagtgccc
ccaaaagtacagcaggagcagctgcagcaagctgggaggtgtgaggaccacctggcacct
acaagtccaggctctggtacatcctctgaggccctaactccatacctgggtgagcagcgg
aaagacacagctgctcctcaggttcctgcagaggaagtggacgacacaagttcctcagag
ggcagcacggtggactgcccagacccggaggagatgctgaggaagatccctgagctggcg
gacgacctggaagaaccagaggactgcttcacagaaggctgcattcaacactgtccctgc
tgcaaagtgaatgccaccaagtttccatgggccgtgggctggcagctgcgcaagacctgc
ttccgaatcgtggagcacagctggtttgagagcttcatcatcttcatgatcctccttagc
agtgggtctctggcctttgaagattattacctggaccagaagcccaaggtcaaagctctg
ctggagtacactgacagggtgttcacctttatctttgtgtttgagatgctgctcaagtgg
gtggcctacggtttcaagaagtacttcaccaacgcctggtgctggctggacttcctcatt
gtgaatatctcactgacaagtcttgtagcgaagatcctggaatattctgatatggcatcc
atcaaagcccttcggaccctccgtgccctgcggccactgcgtgctctgtctcgattcgaa
ggcatgcgggtggtggtggatgccttggtgggtgccatcccatccatcatgaatgtcctc
ctggtctgcctcatcttctggctcatcttcagcatcatgggtgtgaacctcttcgcagga
aagtttgggaggtgcatcaacaataccaatgaagacttttctcttgtgcattggtcaatt
gtggataacatttctgactgtaagaaccaaaactacacaggaaacctcttctgggtcaac
gtgaaagtcaactttgataatgttgcgatgggttacctcgcacttcttcaggtggcaacc
tttaaaggctggatggacatcatgtatgcagctgttgattcccgagaggtcaatagtcag
cccaagtgggaggacaatgtgtacatgtacttgtacttcgtcatcttcatcatttttggt
ggcttcttcacattgaatctctttgttggggtcataattgacaacttcaatcaacagaaa
aaaaagataaggggccaggacatcttcatgacagaggaacagaagaagtactacaatgcc
atgaagaagctgggctccaagaaaccccagaagcccatcccacggcctctgaacaggtac
cagggattcatctttgacgttgtgaccaggcaagcttttgacattgccattatggtcctc
atttgcctcaacatgatcaccatgatggtggagacagatgagcagagtgaagaaaagacg
aaaatcctcggcaaaatcaatcagttcttcgtggctgtcttcgccggcgagtgtgtcttg
aagatgttcgccttaaggcactactacttcaccaatggctggaacgtgtttgacttcatc
gtagtgatcctctccattgggagtctggtgttttctgcaattcttacatcactagaaaat
tacttctctccaacgctgttacgagtcatccgcctggcccgaatcggccgcatcctcagg
ctgatccgagcagccaaggggatccgcacgctgctctttgccctcatgatgtccctccct
gccctcttcaacatcgggctgctgctcttcctcgtcatgttcatctactccatcttcggc
atggccagctttgcttatgtcaagtgggaggccgggatcgatgacatgttcaacttccag
accttcgccaacagcatgctgtgcctcttccagatcacgacgtcagcaggctgggatggc
ctcctcagccccatcctcaacacagggcccccctactgtgaccccaatctgcccaatggc
aatggcactagaggagactgtgggagcccggccgtgggcatcatcttcttcaccacctac
atcatcatctccttcctcattgtggtcaacatgtacattgcagtgattctggagaacttc
aatgtagccacggaggagagcaccgagcccctgagcgaggacgactttgacatgttctat
gagacctgggagaaattcgacccagaggccacccagttcattaacttttctgccctctca
gactttgcagacactctctcaggccccctgagaatcccaaaacccaatcagaatatatta
atccagatggatatgcccttggtccctggagataagatccactgcttggacatcctcttt
gccttcaccaagaatgttctgggagaatcaggagagttggattccctgaaggcaaacatg
gaggagaagttcatggcaactaatctttcaaaagcatcctatgaaccaatagcaaccacc
ctccggtggaagcaagaagacatttcagccactgtcattcaaaaggcctatcggagttat
gtgctatatcgctccctgacactctccaacccttccagagtgcccaggactgaggaggag
gctgtgtcacacctagatgaaggctttgtggcatttatgacaaatgagaattgtgtcctt
ccagacaaatctgaaactgcatctgccacatctttccctccatcctatgacagcgtcact
agaggcctcagtgatagagtcaacatgagcacatccagctcaatgcaaaatgaaaatgaa
gccaccagtaaggaggtgactgcaccagatcctagtgagaatactccagctggacatgtc
cagctctga
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