Sciurus vulgaris (Eurasian red squirrel): 306647829
Help
Entry
306647829 CDS
T11892
Symbol
ACX6B4_010261
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform 1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03013
Nucleocytoplasmic transport
svul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
306647829 (ACX6B4_010261)
03015 mRNA surveillance pathway
306647829 (ACX6B4_010261)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svul03019
]
306647829 (ACX6B4_010261)
Enzymes [BR:
svul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
306647829 (ACX6B4_010261)
Messenger RNA biogenesis [BR:
svul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
306647829 (ACX6B4_010261)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
WHD_Fungal_DR
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
306647829
NCBI-ProteinID:
XP_078973495
LinkDB
All DBs
Position
17:12281255..12301985
Genome browser
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMSSLQIKEEKVKPDTNGVIKTSTTAEKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLRFIDPKRIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE
ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctagcggtggacgaacaggaggcggctgtcaaatcgatg
agcagtttacagatcaaggaagagaaggtcaaaccagataccaatggtgttatcaaaacc
agtaccactgcagagaagacagatgaagaagagaaagaggacagagctgcccagtcttta
ctcaacaagctgatccgaagcaaccttgtggataacactaaccaagtggaagtcctgcag
cgggatcccaactccccgctctactcagtgaagtcttttgaagagcttcgactgaaacca
cagcttctccagggagtctatgccatgggcttcaatcgaccatccaagatacaagagaat
gcattacccatgatgcttgctgaacctccacagaacctgattgcccagtctcagtctggc
actggaaaaacagctgcctttgtcctggccatgcttagcagagtagaaccagcagataga
taccctcagtgtctgtgcctctcccctacatatgagttggcacttcaaacaggaaaagtg
attgagcagatgggcaaatttcatccagaactaaagcttgcttatgctgttcgaggcaat
aaattggaaagaggtcagaagatcagtgagcaaattgtcattggtacccctgggaccgtc
ctggactggtgctccaagctcaggttcattgaccccaagaggatcaaagtgtttgttctg
gatgaggctgacgtgatgatagccacccagggccaccaagatcagagcatccgcatccag
aggatgctgcccaggaactgccagatgttgcttttctctgccacctttgaagactctgtg
tggaagtttgcccagaaagtggtcccagaccctaatgttatcaaactgaagcgtgaggag
gagacgttggacaccatcaagcagtactacgtcctgtgcaataacagagacgagaagttc
caggccttgtgcaacctgtatggagccatcaccatcgctcaagccatgatcttctgccat
acccgcaaaacagctagttggttggcagcagagctctcaaaagaaggccaccaggtggct
ctgctgagtggagaaatgatggtggagcagcgggctgctgtgatcgagcgcttccgagag
ggcaaagagaaggttctggtgaccaccaacgtgtgtgctcgtggtatcgatgttgaacaa
gtgtctgtcgtcatcaactttgatcttcctgtggacaaggacgggaacccggacaatgag
acctacttgcaccggatcgggcgcactggccgctttggcaagaggggcctggccgtgaac
atggtcgacagcaagcacagcatgaacatcctgaacagaatccaggagcattttaataag
aagatagaaagattggacacggatgatttggatgagattgagaaaatagccaactga
DBGET
integrated database retrieval system
