Sciurus vulgaris (Eurasian red squirrel): 306649043
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Entry
306649043 CDS
T11892
Symbol
KARS1, ACX6B4_011475
Name
(RefSeq) lysine--tRNA ligase isoform 1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
306649043 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svul01007
]
306649043 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svul03016
]
306649043 (KARS1)
Enzymes [BR:
svul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
306649043 (KARS1)
Amino acid related enzymes [BR:
svul01007
]
Aminoacyl-tRNA synthetase
Class II (A)
306649043 (KARS1)
Transfer RNA biogenesis [BR:
svul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
306649043 (KARS1)
Prokaryotic type
Other AARSs
306649043 (KARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Dec-1
GEX3_C
Motif
Other DBs
NCBI-GeneID:
306649043
NCBI-ProteinID:
XP_078975794
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All DBs
Position
17:11145462..11162739
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AA seq
625 aa
AA seq
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MLMQAAVRLVRGSLRQTSWAEWGQRELRLGQLAPFTALHKDKPLSNKRSELKRRLKAEKK
VAEKEAKQKELSEKQLSQATAAATNHANENGVGSEEESLDPNQYYKIRSQAVHQLKVNGE
DPYPHKFHVDISLTHFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGV
KLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHM
LPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMN
IIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN
PEFTTCEFYMAYADYHDLMEITEKMVSGMVKNITGNYKITYHPDGPEGQAYEIDFTPPFR
RISMVEELEKALGVKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFL
EVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLF
EEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRITMFLTDSNNIKEVLLFPA
MKPEDKKDTVATTDRPESTTVGTSV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcaagctgctgtaaggcttgttagggggtccttgcgccaaacctcctgggca
gagtggggtcagagggaacttcgactgggtcaacttgctcctttcacagcgcttcacaag
gacaagccactttctaataaaagaagtgaactaaagagacgcctgaaagctgagaagaaa
gtggcagagaaggaggccaagcagaaagagctcagtgagaaacagctaagccaggccact
gctgctgccaccaaccatgccaatgaaaatggtgtgggttctgaggaggagagcctggac
ccaaatcaatactacaaaatccgcagtcaagcagtccaccagctgaaggtcaatggggag
gacccctacccacataagttccatgtagatatctcgctcactcacttcatccaagaatat
agtcacctgcagcctggagatcacctgactgacatcaccttgaaggtggcaggtaggatc
catgccaaaagagcttctgggggaaagctcatcttctatgaccttcgaggagagggggtc
aaattgcaagtcatggccaattccaggaattataaatcagaggaagaatttattcatatc
aataacaaactacgccgaggagacataattggagttcaggggaatcctgggaaaaccaag
aagggtgagctgagtatcattccctatgagatcacactgctctctccctgcttgcatatg
ctacctcatcttcactttggcctcaaagacaaggaaacaaggtatcgtcagagatacttg
gacttgatcctgaatgactttgtgaggcagaaatttatcattcgctctaagatcatcacg
tacatacgaagtttcttggatgagttggggtttctagagattgaaactcctatgatgaac
atcatcccagggggagctgtggccaagcctttcatcacttaccacaatgagctggacatg
aatttatatatgagaattgctccggaattataccataagatgctggtggtcggtggcatt
gaccgggtttatgaaattggacgccagttccggaatgaagggattgatttgactcacaat
cctgagttcaccacctgtgagttctacatggcatatgcagactatcatgatctcatggaa
atcacagagaagatggtttcaggaatggtgaagaacattacaggcaattacaagatcacc
taccacccagatggtcccgagggccaagcctatgagattgacttcactccacctttccgg
agaatcagcatggtagaagagcttgagaaagctctaggggtgaagctgccagaaactaac
ctctttgaaactgaagaaactcgcaaaattcttgatgatatctgtgtggcaaaagctgtc
gaatgccctccacctcggaccacagccaggctccttgataagcttgttggggagttcctg
gaagtgacatgcatcaatcctacgttcatctgtgatcacccgcagataatgagccctttg
gctaaatggcaccgctctaaagagggtttgaccgaacgctttgagctatttgtcatgaag
aaggaaatatgcaatgcctacactgagctgaatgatcccatgaggcagcggcagctgttt
gaagaacaggccaaggccaaggctgctggtgatgatgaggccatgttcatagatgaaaac
ttctgcactgccctggaatatggcctgcctcccacagctggctggggcatgggcattgac
cgcatcaccatgtttctcacagattccaataacatcaaggaggtacttctgtttcctgcc
atgaaacctgaagacaagaaggacactgtagcaaccactgatagaccggaaagcacaact
gttggcacttctgtctag
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