Sciurus vulgaris (Eurasian red squirrel): 306649436
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Entry
306649436 CDS
T11892
Symbol
USP42, ACX6B4_011868
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform 1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors
306649436 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system
306649436 (USP42)
Enzymes [BR:
svul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
306649436 (USP42)
Peptidases and inhibitors [BR:
svul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
306649436 (USP42)
Ubiquitin system [BR:
svul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
306649436 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
306649436
NCBI-ProteinID:
XP_078976565
LinkDB
All DBs
Position
18:complement(30379693..30428488)
Genome browser
AA seq
1337 aa
AA seq
DB search
MTIVDKAESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGAV
VYSNSSVPDKSKPSPQKEQVLGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKYDGWCKKM
VPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLY
AVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKN
GGELTHSTHSPGQSSPRPVISQRVVTNKQATPGFIGPQLPSHLIKNPPHLNGTGPLKETP
SSSMSSPNGNPSVNRAGPVNASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQS
QPNLHSNSLEAPNKPVPSSTITNSSAIQSTSNASTMSISNKVAKPMSPSESCSKPVVNGK
SKLSSSVLVPYGAESSEESDEESKGLAKENGVGTTTSSHSGGEEAEDDEASQHELQEPIT
LNGANGAEDNPKENGLSFDGASCQVQPTLHSENPFSKANGLPGKLMPAPLPSLPEDKILE
TFKLSNKVKGPTDETSSTGTEMSPTEDPAAEPEVGSVTAGSHEKVETVTSLSSKLKKALP
PSDPSTKSTKEEVSENMSAKPDESLPIINNLCNTNKNTTGDDHLSKLCDTESLTNDQSKP
SQEVKGMLIESPRDSAPVEIVEKLSPASSVRSEDECEHKLLVYLSRDRCRDAEDPSRGTV
MSTDALTSPQPDRATGAHSDGGAEPSRGERGDENKVGQKVQDRSPVKEKISSLRRVDRGH
YRNRRDRSSSGEHTRESRSKTEDHYHKKRRYIRERGKQERHPAEHCNGSQHPPCHSERGS
PSERRSLGRYSYHHSRSRGGSDQDWTRYHHSESEHAWGREKYYPEKTRWDKCRYYHDRYI
PYAAREAREWRPLHSSGREHDRAGQHARLHKDCYRGRKGWEPPARGKERHHFHSVRVGAA
SALPLHPERYPQEEAALGAEDSSFSLSDRFHEHETAKSRKRRYESIDPNDSHLEKKAHRS
LQKDLLEEPKAKKHKKSKKKKKSKDKHRERDCRHQQDSDLSVAYSDADLHRHKKKKKKKK
RHSRKSEDFVKDSGLHLMKAMSYETVNHFRRTEGSFLLTDGLPLEGIGPFREKTKHLRME
SRADRCHLSEYGQGKRR
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagctgaatcttcagacccgtcaacctatcagaatcagcctggc
agttctgaggcagtctcacctggagacatggatgcaggttctgccagctggggtgctgtg
tcttcattaaatgatgtttcaaatcacacactttccttaggaccagtacctggtgctgta
gtttattcaaattcttctgtacctgataaatcaaagccgtctccacaaaaggagcaagtc
ctaggtgatggcattgctcctccacaaaaagttctttttccatcggagaagatttgtctt
aagtggcaacaaactcacagagttggcgctgggctccagaatttgggcaatacctgtttt
gccaatgctgctttgcagtgtttaacttacacaccacctcttgccaattatatgctatca
catgaacactccaagacatgtcatgcagaaggattttgtatgatgtgtacaatgcaagcg
catattacccaggcactcagtaatcctggggacgttattaaaccaatgtttgtcatcaat
gagatgcggcgtatagctaggcatttccgttttggaaaccaagaagatgcccatgaattt
cttcagtatactgttgatgctatgcaaaaagcatgtttgaatggcagcaataaattagac
agacacacccaggccaccacacttgtttgtcagatatttggaggatacctaagatctaga
gtcaagtgtttaaattgcaagggcgtttcagatacgtttgatccatatcttgatataaca
ttggagataaaggctgcccagagtgttaataaggcattggagcagtttgtgaaaccagaa
cagctggacggagaaaactcctacaagtgcagcaagtacgatgggtggtgtaaaaagatg
gttccagcttcgaagaggttcactatacatagatcttcaaatgttcttacactttctctg
aaacgctttgcaaattttactggtggaaaaattgctaaggatgtgaaatatcctgaatat
cttgatattcgtccatacatgtctcaaccaaatggagaaccaattatttatgttctgtat
gcagtgctggtacatactggttttaattgccatgctggccattacttctgttacataaaa
gctagtaatggcctctggtatcaaatgaatgattccattgtatctaccagtgatattaga
tcggtactcagccaacaagcttatgtgctcttttatatcaggtcccatgatgtgaaaaat
ggaggtgaacttactcattccacccatagcccgggccagtcctctccccgcccagtaatt
agtcagcgggttgtaaccaacaagcaggccacaccagggtttattggaccacagcttccc
tctcacctgataaagaatccacctcacttgaatgggactgggccactgaaggaaacgcca
agcagttccatgtcaagtcctaatggaaatcccagtgtcaacagggctggtcctgttaat
gcttccacttctgttcaaaactggtcagttaacaggccctcagttattccagaacatccc
aagaaacaaaaaattaccatcagtattcacaacaagttgcctgttcgccaaggtcagtct
caacctaaccttcatagcaattctttggaggctcctaacaagcctgttccctcttctacc
attaccaattcttctgcaatacagtctacctcgaatgcatctacgatgtcaatttctaat
aaagtagcaaaacccatgtctccgagtgaatcctgctctaagccagtggtgaatggcaag
tccaagctaagctccagcgtgctggtcccctatggtgccgagtcatccgaagagtctgac
gaggaatcaaagggcctggccaaggagaacggtgtgggtacgacgacgagctctcactct
ggcggcgaagaggccgaagacgatgaggcctctcagcatgagcttcaagaacctatcact
ttaaatggtgctaatggtgcagaggacaacccaaaagaaaatggcctgtcatttgatggt
gccagctgccaagtccagcctactctacactcagaaaaccccttttctaaagcgaatggt
cttcctggaaagttgatgcctgctcctttgccatctctcccagaagacaaaatcttagag
accttcaaacttagcaacaaagtaaaaggcccaacagatgaaacaagttcgactggaaca
gagatgagtccaactgaggaccctgctgcagagccggaagttggcagtgtcactgctggt
tcccatgagaaagtggagacagtcacaagtctgagcagcaagttaaagaaggctctgcca
ccctccgaccccagcaccaaatctaccaaagaagaagtctctgaaaacatgtcagcaaaa
cctgatgagtctttgcccattattaacaatctttgtaacaccaacaagaataccacgggg
gatgatcacctttctaaactgtgtgacactgagagtctcacaaatgaccagagcaaacca
tcccaagaggtaaaaggaatgttaattgagagtccccgggactctgccccagtggagata
gtggagaagctgagcccagcttcctcagtacgttcagaagatgaatgtgagcataaactc
ttagtttacctcagcagagacaggtgcagggacgcagaggatccttccagaggcacagtc
atgtccacagatgcattgacttctccccagccagacagggccacaggagcccactcagat
ggcggtgccgagcccagccgtggtgagagaggtgatgaaaacaaggtcggacagaaagtt
caggatcgttctccagttaaggaaaaaatcagtagcctcagaagagtggatcgaggacat
tatcgtaaccgcagagatcgttcctccagcggagagcacacgagggaaagtaggagcaag
acagaggaccattatcacaaaaagcggcgctacattagagagcggggcaagcaggagcgt
cacccagcagagcactgtaatgggagccagcacccgccttgccacagcgagcggggcagc
cccagcgagcgccgctctctgggcaggtacagctaccaccactctcgcagcagaggtggc
tcagaccaggactggaccaggtaccaccactcagagagtgagcatgcctggggccgggag
aagtactaccccgagaaaacaaggtgggacaagtgcaggtattatcatgacaggtacatc
ccctacgcagccagggaggccagggagtggaggcccctgcacagcagcggccgggagcat
gaccgagcaggacagcacgcgcggctgcacaaggactgctacaggggcaggaagggctgg
gagcctcctgccagggggaaggagcggcaccacttccacagtgtgcgggtgggggcggcc
tctgcccttcctctgcaccccgagaggtacccgcaggaggaggctgccctgggagctgaa
gacagcagtttcagcctctctgatcggtttcacgaacatgaaactgcaaagtcgcggaaa
cggcggtacgagagcatcgaccctaacgacagccacttggaaaagaaagcccacagaagc
ttacagaaggaccttttagaagagccgaaggcgaagaagcacaagaagtcaaagaagaaa
aagaaatccaaagacaaacaccgagagcgcgactgcaggcatcagcaagattcggatctt
tcagtagcatactctgatgccgacctccacagacacaaaaagaagaagaagaaaaagaag
agacattcaaggaagtcagaggactttgtgaaagattcaggactacacttgatgaaggcc
atgagctatgagactgtcaaccatttccggagaacagagggcagttttctactcactgat
ggcctgcctctggaaggcatcggacctttccgggaaaaaacaaagcatttaaggatggaa
agcagggctgacaggtgccatctgtctgagtatggccagggtaagaggagataa
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integrated database retrieval system
