Sciurus vulgaris (Eurasian red squirrel): 306649907
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Entry
306649907 CDS
T11892
Symbol
TBPL2, ACX6B4_012339
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03022
Basal transcription factors
svul05016
Huntington disease
svul05017
Spinocerebellar ataxia
svul05165
Human papillomavirus infection
svul05166
Human T-cell leukemia virus 1 infection
svul05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
306649907 (TBPL2)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
306649907 (TBPL2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
306649907 (TBPL2)
05165 Human papillomavirus infection
306649907 (TBPL2)
09164 Neurodegenerative disease
05016 Huntington disease
306649907 (TBPL2)
05017 Spinocerebellar ataxia
306649907 (TBPL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svul03000
]
306649907 (TBPL2)
03021 Transcription machinery [BR:
svul03021
]
306649907 (TBPL2)
Transcription factors [BR:
svul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
306649907 (TBPL2)
Transcription machinery [BR:
svul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
306649907 (TBPL2)
RNA polymerase III system
TFIIIB
306649907 (TBPL2)
RNA polymerase I system
SL1/TIF-1B
306649907 (TBPL2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
306649907
NCBI-ProteinID:
XP_078977497
LinkDB
All DBs
Position
2:<47237235..47259570
Genome browser
AA seq
338 aa
AA seq
DB search
MEGNTYLELYLDRCAAQDDLALPVSPLFSPVVPYEGYLRNSSNPEIIFSSHLEVRETSGD
FSSVDLSFLPDELTQENKDQTVIKSKCQTEENCKTKQNRLPLPSEQLRVKNSSLSNSHSF
LQPGGTDSVQLSPEKPNSDTLSLSSITPMTPMTPLAECSGIVPQIQNIVSTVNLACRLDL
KKIALQAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV
VQKLGFPARFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRI
VLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaacacttacctggaactctacctggaccgctgcgccgcccaggatgacctt
gctctacccgtgtctcccctgttcagcccagttgtaccttatgaggggtacctacgtaat
tcatccaatccagagattatatttagttcacatcttgaagtcagagaaacatccggtgat
ttctcatctgtggatcttagcttcctaccagatgaacttacccaagaaaataaagaccag
actgtcattaaaagcaaatgtcaaactgaagaaaattgtaaaactaaacaaaatagattg
ccactacccagcgaacagctgagggtaaaaaacagcagtttatcaaattcccattcattt
ctgcaacctggtggtactgactcagtccagctctcacctgagaaaccaaactctgacacc
ttgtctctgtcatccataactcccatgactccaatgacacctcttgcagaatgttctgga
attgtgcctcaaatacagaacatagtttccactgtaaacctggcctgtagactggatctg
aagaaaatagctttgcaggccaaaaatgcagaatacaacccaaagaggtttgctgcagtt
ataatgaggatccgagagcccaggacaacagccctcatatttagctctggaaaaatggtc
tgcacaggagccaaaagtgaagagcaatctcgactagcagcaagaaagtatgctcgtgtg
gtgcagaagcttgggttccctgctagattcctcgattttaaaattcagaacatggttgga
agctgcgatgtgaggttttccatcaggctagagggtttggtgctaacccatcaacagttc
agtagttatgaacctgaactgtttcctggccttatttatagaatggtaaaaccacgaatt
gtgttgcttatcttcgtatctgggaaagttgtattgacgggtgccaaagaacgttctgaa
atctatgaagcatttgaaaacatctatcctattctaaaaggttttaaaaaaacctga
DBGET
integrated database retrieval system
