KEGG   Sciurus vulgaris (Eurasian red squirrel): 306650595
Entry
306650595         CDS       T11892                                 
Symbol
ACX6B4_013027
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
svul  Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04066  HIF-1 signaling pathway
svul04120  Ubiquitin mediated proteolysis
svul05170  Human immunodeficiency virus 1 infection
svul05200  Pathways in cancer
svul05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:svul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    306650595 (ACX6B4_013027)
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    306650595 (ACX6B4_013027)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    306650595 (ACX6B4_013027)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    306650595 (ACX6B4_013027)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    306650595 (ACX6B4_013027)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svul04121]
    306650595 (ACX6B4_013027)
   03400 DNA repair and recombination proteins [BR:svul03400]
    306650595 (ACX6B4_013027)
Ubiquitin system [BR:svul04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     306650595 (ACX6B4_013027)
   Cul5 complex
     306650595 (ACX6B4_013027)
DNA repair and recombination proteins [BR:svul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     306650595 (ACX6B4_013027)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 306650595
NCBI-ProteinID: XP_078978786
LinkDB
Position
X:complement(74464742..74465214)
AA seq 120 aa
MIWRHKTTIFMDAKESSTMFELKCILEGILKLPPDEQRLYKDDQLLDDGKTLGKCGFTSQ
TARPPAPVTVGLAFRADDAFEALCMEPFSSPPELPDVTKPQDSGGSANEQAVQRGPQAHP
NT seq 363 nt   +upstreamnt  +downstreamnt
atgatctggcgccacaagaccaccattttcatggacgccaaggagtccagcaccatgttc
gagctgaagtgcatcctcgagggtatcctcaagctgccgcccgacgagcagcggctctac
aaggatgaccagctacttgatgacggcaaaactctgggcaaatgtggcttcaccagccaa
acagcacgaccacccgccccagtcacagtggggctggccttcagggccgatgatgccttt
gaggccctgtgcatggagcccttctctagcccgccagagcttccagatgtgacgaagccc
caggattccggaggcagcgccaatgaacaagctgtgcagcgagggcctcaagcccatcct
tga

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