Sciurus vulgaris (Eurasian red squirrel): 306650909
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Entry
306650909 CDS
T11892
Symbol
SMARCA1, ACX6B4_013341
Name
(RefSeq) putative global transcription activator SNF2L1 isoform 1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
306650909 (SMARCA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svul03036
]
306650909 (SMARCA1)
Chromosome and associated proteins [BR:
svul03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
306650909 (SMARCA1)
CERF complex
306650909 (SMARCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
306650909
NCBI-ProteinID:
XP_078979477
LinkDB
All DBs
Position
X:23439491..23511678
Genome browser
AA seq
1058 aa
AA seq
DB search
MEPDTSAVAATVAAADATATIAVSEDEQPGPSTSKEEGAAAAATEATATTEKGEKKREKN
ISPFQLKLGTKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSP
LNMKLGRPRIKKDEKQNLISAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKG
GPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVP
KSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVF
KKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPD
VFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLS
KMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH
IVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRSYEYCRLDGQTPHEE
REEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG
QKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHG
ATHVFASKESELTDEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQSLYKFEGE
DYREKQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFF
PPHLFELLEKEILYYRKTVGYKVPRNPDIPNPALAQREEQKKIDGAEPLTPEETEEKEKL
LTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDI
EKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLIC
MLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEE
RERAEKKKRATKTPMSQKRKAESATESSGKKDVKKVKS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggagccggacacctccgcagtggcagccaccgtggcagccgctgatgcgaccgccaca
atcgcggtctcagaggacgagcagccggggccgtctacctctaaggaggagggagcggcc
gccgcggccaccgaagccaccgcgaccacggagaagggcgagaagaagagggagaaaaac
atttctccgtttcaactcaaacttggtactaaagcttctaaatctgaaaaggaaatggac
ccagaatatgaagaaaaaatgaaagcagaccgtgcaaagagatttgagtttttactgaag
cagacagaactttttgcacatttcattcaaccttcagcacaaaaatctccaacatctcct
ctgaacatgaaattgggacgtcctcgaataaagaaagatgaaaagcagaacttaatttct
gctggagactatcgccacaggcgcactgaacaagaagaagatgaagagctactgtcggag
agtcggaaaacatcgaatgtttgtgtgagatttgaggtgtcaccttcgtatgtgaaagga
ggacccctgagagattatcagattcgagggctaaactggttgatctccttatatgaaaat
ggagtcaatggtattttggctgatgaaatgggacttggtaagactttacaaacgattgct
ttgcttggctacctgaagcactaccgaaacattcctggacctcacatggttttagttcca
aagtctactttacacaactggatgaatgaatttaaacgatgggtcccatctctccgtgtt
atttgtttcgttggagacaaagacgcaagagctgcttttattcgtgatgaaatgatgcca
ggagagtgggatgtttgtgttacttcttatgagatggtaattaaagaaaaatctgtattc
aaaaagtttcattggcgataccttgtcattgatgaagctcacagaataaaaaatgaaaaa
tctaagctttcagagattgttcgtgagttcaagtcaactaaccgcttacttctaactgga
acacctttgcagaataacttgcatgaactctgggcattactcaactttttgttgcctgat
gtctttaattctgcagatgactttgattcttggtttgatactaaaaattgcctgggtgat
caaaaactagtggaaagacttcatgcagttttaaaaccatttttgttacgtcgtataaaa
actgatgtagaaaagagtctgcctcctaaaaaggaaataaaaatttacttgggactaagt
aagatgcaacgagaatggtacacaaaaatcctgatgaaagatatcgatgttttaaactct
gctggcaaaatggacaagatgcgactcctaaacattctgatgcagcttcgcaagtgttgt
aatcatccatatttgtttgatggtgctgagcctggtccaccttataccacagatgagcat
attgtcagtaacagtggtaaaatggttgttctggataaactgttggccaaactcaaagaa
cagggttcaagggttctcattttcagtcagatgactcgcttgcttgacattttggaggat
tattgtatgtggcgtagttatgagtattgtcgactggatggacaaaccccacatgaagaa
agagaggaagcaatagaggcctttaatgctcctaatagtagcaaattcatctttatgttg
agtaccagggccggaggtcttggaattaacttggcaagtgctgatgtggttatcctctat
gattcagactggaatccacaggttgatctacaagctatggatcgagcccatcgaattggt
cagaagaagccagttcgtgtattccgtctcatcactgataacactgttgaagaaaggatt
gtagagagagctgagataaaactgagacttgattcaattgttatacaacaaggaagactc
attgatcaacaatctaacaagctggcaaaagaagaaatgttacaaatgatacgtcatgga
gccactcatgtttttgcttctaaagagagtgaactaacagatgaagacattacaactatt
ctggaaagaggggaaaagaagactgcagagatgaatgaacgcttgcagaaaatgggagag
tcttctctaagaaattttagaatggatattgaacaaagtttgtacaaatttgaaggagaa
gactatagagaaaaacagaagcttggtatggtggaatggattgaacctcctaaacgagaa
cgcaaagcaaactacgcagtggatgcctactttagagaggctttgcgtgtcagtgagcca
aagattccaaaggctccacggcctccaaaacagccaaatgttcaggattttcagtttttc
ccacctcatttatttgagcttttggaaaaggaaattctttattaccggaagacagtaggt
tataaggtcccaaggaatcctgacatccctaatccagctctggctcaaagagaagagcaa
aaaaagatcgatggagctgaacctcttacaccagaagagactgaagaaaaggaaaagctt
ctcacccaaggttttacaaactggactaaacgagattttaaccaatttattaaagctaat
gagaagtatggaagagatgacattgataatatagctcgagaggtagaaggcaaatcccct
gaggaggttatggagtattcagctgttttttgggaacgttgcaatgaattacaggacatt
gagaaaattatggcacaaattgaacgtggagaagcaagaattcagcgaaggatcagtatt
aagaaagccctggatgccaaaattgcaagatataaggctccatttcatcagttacgtatt
cagtatggaaccagcaaaggaaagaactatactgaggaagaagatagattcttgatttgt
atgttacacaaaatgggctttgatagagaaaacgtgtatgaagaattaagacagtgtgta
cggaatgctccccagtttagatttgactggtttatcaagtcgagaacagccatggaattc
cagagacgctgtaacactctgatttcattgattgagaaagaaaatatggaaattgaggaa
agagagagagcagaaaagaagaaacgggctactaaaactccaatgtcacagaaaagaaaa
gcagagtcagctactgagagctctggaaagaaggatgtcaagaaggtgaaatcctaa
DBGET
integrated database retrieval system
