Sciurus vulgaris (Eurasian red squirrel): 306651245
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Entry
306651245 CDS
T11892
Symbol
SMC1A, ACX6B4_013677
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform 1
KO
K06636
structural maintenance of chromosome 1
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04110
Cell cycle
svul04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
306651245 (SMC1A)
04114 Oocyte meiosis
306651245 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svul03036
]
306651245 (SMC1A)
Chromosome and associated proteins [BR:
svul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
306651245 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
306651245 (SMC1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
306651245
NCBI-ProteinID:
XP_078979886
LinkDB
All DBs
Position
X:91547338..91597894
Genome browser
AA seq
1329 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEGLTELPSLALNLAILLPQPPQSLGLQHPVLMIRSLRIASSRISRGSGDKHLIPS
SWSLRLPAPIWTDCSVGLRHSCHPGTSLHYSSGLDPIFLGPHIFLFLSYSLVEDIVVIFQ
HPFHSSPIE
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaaatcgtacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgctaggtgaaaaaaccagcaacctaagggtaaagacc
ctgcgggacctgatccatggagctcctgtgggcaaaccagctgccaaccgggcctttgtc
agcatggtctactctgaggagggtgctgaggatcgcacctttgctcgtgtcattgtagga
ggttcttctgaatacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaaattgggcattctcatcaaagctcgtaacttccttgtctttcagggtgctgtg
gaatctattgccatgaagaaccccaaagaaaggacagctctatttgaagagatcagtcgc
tctggggagctggcccaggagtatgataagcgaaagaaggaaatggtgaaggctgaagag
gacacacaatttaattaccatcgcaagaaaaacattgcagctgaacgaaaggaggccaaa
caggagaaagaagaggcggatcgctaccagcgcctgaaagatgaggtggtgcgagctcag
gtacagctgcaactctttaagctttaccataatgaagtagaaatcgagaaactcaacaag
gaactggcctcaaagaacaaagagattgagaaagacaagaagcgaatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatc
gagaaggagatcaaggagaaggactcagagctgaatcagaagcgacctcagtacatcaaa
gccaaggagaatacctcccacaaaatcaagaagctggaagcagctaagaagtctctgcag
aatgctcagaagcactataagaagcgtaaaggtgacatggatgaactggagaaggagatg
ctttcggtggagaaggcccggcaggagtttgaagaacgaatggaagaggagagtcagagt
cagggcagagacttgaccctggaggagaatcaggtaaagaaataccaccggctgaaagaa
gaagccagcaagagagcagccactttagcccaggagctggagaagttcaatcgagatcag
aaagctgaccaggaccgtttggatctggaagagcggaagaaagtagagacagaggccaag
atcaagcagaaattacgggagattgaagagaatcagaagcggattgaaaagctggaggaa
tacatcactactagcaagcagtccctagaggagcagaagaagctagagggagaattgact
gaggaggtggagatggccaagcgacgaattgatgagattaataaggagctgaatcaggtg
atggagcaattgggggatgcacgcattgaccgccaggaaagcagccgtcagcagagaaag
gcagagataatggaaagcatcaagcgcctttaccctggctctgtgtatggtcgcctcatt
gacctctgtcagcccacacaaaagaagtaccagattgctgtgaccaaggttttgggcaag
aacatggatgccattattgtagactcagagaagacaggccgggattgtattcaatatatc
aaggagcagcgtggggagcctgagacgtttttgcctcttgactacctggaggtgaaacct
acggatgaaaaactccgggagctgaaaggggccaagctagtgattgatgtgattcgctat
gagccacctcacatcaaaaaagccctgcagtatgcttgtggcaatgcccttgtctgtgac
aatgtggaagatgcccgccgcattgcctttggaggccatcagcgccacaagacagtggca
ctggatgggaccctgttccagaagtcaggagtcatctctggtggagccagtgacctgaaa
gccaaggcacggcgctgggatgagaaagcagtagacaaattaaaagagaagaaggagcgg
ttgacagaggagctgaaagagcaaatgaaggcaaagcggaaagaggcagagctgcgtcag
gtgcagtctcaggcccatggattgcagatgcgactcaagtactcacagagtgacctagaa
cagaccaaaacacggcatctggcactaaatctccaggaaaagtccaagctggagagtgag
ctggccaacttcgggcctcgcattaatgatatcaagaggattatccagagccgagagagg
gaaatgaaagacttgaaagagaagatgaaccaggtagaagatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgcaacatccgggagtttgaggaagagaaggtgaagcgacag
aatgaaattgccaagaagcgtttggagtttgaaaatcagaagactcgcttgggcatccag
ttggattttgaaaagaaccagctgaaggaggaccaggataaagtacacatgtgggaacag
acagtgaaaaaggatgaaaatgagatagaaaaactcaagaaggaggaacaaagacacatg
aagatcatagatgagaccatggcccaactacaagacctgaagaatcagcacctggccaag
aagtcagaagtgaatgacaagaatcatgagatggaagagattcggaagaaactggggggt
gccaacaaggaaatgacccacttacagaaggaggtgacagccattgaaaccaagcttgaa
cagaagcgcagtgatcgccacaacttgttacaggcctgcaagatgcaggacatcaagttg
cctctgtcaaagggcaccatggatgatattagtcaggaagagggtagctcccaaggggag
gagtcagtgagtggttctcagagaacttccagtatctatgcaagagaagccctcattgag
attgactacggtgacctgtgtgaggatctgaaggatgcccaggctgaggaggagatcaag
caagaaatgaacacactgcagcaaaagctgaatgagcagcagagtgtgcttcagcggatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtacgagacaagttccaggag
acctcagatgaatttgaggcagcccgaaagcgagcaaagaaggccaaacaggcttttgaa
cagattaagaaggagcgctttgaccgtttcaatgcttgttttgaatctgtggctactaac
attgatgagatctacaaggctctgtcccgtaacagcagtgcccaggcattcctgggccct
gagaaccctgaggagccctacttggatggtatcaactacaattgtgtggctcctggcaaa
cgcttccggcctatggacaacttgtcaggcggggagaagacagtggcagctctggccctg
ctctttgccatccacagctacaagccagcccccttcttcgtcctggatgagatcgatgct
gccttggataacaccaacattggcaaggtggcaaattatatcaaggagcagtcgacttgc
aacttccaggccattgtcatctctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctatcctgagggcctcactgagttgcccagtctggccttgaacttggcaatc
ctcctgcctcagcctccccagtcactgggattacagcatccagttttgatgataagaagt
ctgaggatcgcaagttcaaggatctcaagagggagtggagataaacacctgataccttcc
tcctggagcctccgtcttcctgctccaatttggactgattgctctgtaggcctgcggcac
agctgtcatcctgggacgtcccttcattactcttctgggttggacccaatctttcttgga
ccccatatcttcctctttcttagttactcccttgtagaggacattgtggttattttccaa
catccattccactcctcccccattgaataa
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