Sciurus vulgaris (Eurasian red squirrel): 306653055
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Entry
306653055 CDS
T11892
Symbol
HIF1A, ACX6B4_015487
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04066
HIF-1 signaling pathway
svul04137
Mitophagy - animal
svul04140
Autophagy - animal
svul04148
Efferocytosis
svul04659
Th17 cell differentiation
svul04919
Thyroid hormone signaling pathway
svul05167
Kaposi sarcoma-associated herpesvirus infection
svul05200
Pathways in cancer
svul05205
Proteoglycans in cancer
svul05208
Chemical carcinogenesis - reactive oxygen species
svul05211
Renal cell carcinoma
svul05230
Central carbon metabolism in cancer
svul05231
Choline metabolism in cancer
svul05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
306653055 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
306653055 (HIF1A)
04137 Mitophagy - animal
306653055 (HIF1A)
04148 Efferocytosis
306653055 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
306653055 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
306653055 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
306653055 (HIF1A)
05205 Proteoglycans in cancer
306653055 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
306653055 (HIF1A)
05230 Central carbon metabolism in cancer
306653055 (HIF1A)
05231 Choline metabolism in cancer
306653055 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
306653055 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
306653055 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
306653055 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svul03000
]
306653055 (HIF1A)
Transcription factors [BR:
svul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
306653055 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
306653055
NCBI-ProteinID:
XP_078981982
LinkDB
All DBs
Position
2:complement(41489804..41534210)
Genome browser
AA seq
825 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNGGQQ
KLEDQQLEEVPLYDDVMCPSSSEKLQNINLAMSPSASETPKPLRSSADPALNQEVALKLE
PNPESLELSFTHAPDSRSPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPQSVSTISVF
QQTQMQEPNINTTTATTTTDELKTVTKDGMEDIKILIASSSPTHVPKETTSATTPPPYSD
TQSRTASPNRAGKGVIEQTEKSHPRSPNVVSVTLSQRNTVPEEELNPKILALQNVQRKRK
MENDGSLFQAIGIGTLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACR
LLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEDLLRALDQVN
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggaggcgcgaacgacaagaaaaagataagttctgaacgtcgaaaagaa
aagtctagagatgcagccagatctcggcgaagcaaagagtctgaagttttttatgaactt
gctcatcagttgccgcttccccataatgtgagctcacatcttgataaggcttctgttatg
aggcttaccatcagttatttgcgtgtgaggaaacttctggatgctggtgatctggatatt
gaagatgaaatgaaggcacagatgaactgcttttatttgaaagccctggatggctttgtt
atggtgctcacagatgatggtgacatgatttacatttctgataacgtgaacaaatacatg
ggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccgtgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccccgtgaaaaagggtaaagaa
caaaacacacagcgaagcttctttctcagaatgaagtgtaccctaactagccgggggaga
actatgaacataaagtctgcaacatggaaggtacttcactgcacaggccatatccatgta
tatgataccaacagtaaccagtctcaatgtggatacaagaaaccaccaatgacatgcctg
gtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagacagcaag
acttttctcagtcgacacagcctggatatgaaattttcttattgtgatgaaagaattact
gaattgatgggatatgaaccagaggaacttttgggccgctcaatttatgaatattatcat
gctttggactctgatcatctgaccaaaactcatcatgacatgtttactaaaggacaagtc
accacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggtagaaactcaa
gcaactgttatatataacaccaagaactctcaaccacaatgcattgtatgtgtaaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtgtc
ctcaaaccagttgagtcttcagatatgaaaatgactcagctcttcaccaaagttgaatca
gaggatacaagtagcctctttgataaacttaagaaggaacctgatgctttaactttgctg
gccccagctgctggagacacaatcatatctttagattttggcagcaatggtggacaacag
aaactggaagaccaacaacttgaggaagttccattgtatgatgatgtaatgtgcccctca
tccagtgaaaaattacaaaatataaatttggccatgtctccatctgcctctgaaactcca
aagccacttcgaagtagtgctgacccagcactcaatcaagaagttgcattaaaattagaa
ccaaatccagagtcactggaactttcttttacccatgccccagattcaagatcgccagcc
agtccttctgatggaagcactagacagagttcacctgagcctaacagtcccagtgaatac
tgttttgatgtggatagtgatatggtcaatgtattcaagttggaattggtagaaaaactt
tttgctgaagacacagaagcaaagaatccattttcaactcaggacactgatttagacttg
gaaatgttggccccctatatcccaatggatgatgatttccagttacgttcctttgatcag
ctgtcaccattagaaagcagttcttcaagccctcaaagtgtgagcacgatttcagtattc
cagcagactcaaatgcaagaacctaatattaacaccaccactgccactaccaccactgat
gaattaaaaacagtgacaaaagatgggatggaagacattaaaatactgattgcatcttca
tctcctacccatgtacctaaagaaactactagtgccacaacaccaccaccatatagtgat
actcaaagtcgaacagcctcaccaaacagagcaggaaaaggagtcatagaacagacagaa
aaatctcatccaagaagccctaatgtggtatctgtcactttgagtcaaagaaatacagtt
cccgaggaagaactaaatccaaagatactagctttgcagaatgttcagagaaagcgaaaa
atggaaaatgatggttcactttttcaagcaataggaattggcacactattacagcaacca
gatgatcgtgcaactaccacatcactttcttggaaacgtgtaaaaggatgcaaatctagt
gaacagaatggaatggagcaaaagacaattattttaataccctctgatttagcatgtaga
ctgctggggcaatcaatggatgagagtggattaccacagctgaccagttatgattgtgaa
gttaatgctcctatacaaggcagcagaaacctactgcagggtgaagatttactcagagct
ttggatcaagttaactga
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