Sciurus vulgaris (Eurasian red squirrel): 306655166
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Entry
306655166 CDS
T11892
Symbol
WARS1, ACX6B4_017598
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
306655166 (WARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svul01007
]
306655166 (WARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svul03016
]
306655166 (WARS1)
Enzymes [BR:
svul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
306655166 (WARS1)
Amino acid related enzymes [BR:
svul01007
]
Aminoacyl-tRNA synthetase
Class I (G)
306655166 (WARS1)
Transfer RNA biogenesis [BR:
svul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
306655166 (WARS1)
Prokaryotic type
306655166 (WARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHEP-TRS
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
306655166
NCBI-ProteinID:
XP_078985635
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All DBs
Position
2:6854579..6886418
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AA seq
481 aa
AA seq
DB search
MADVPNGEPCASPLDLFNSIAAQGELVRTLKAEKASKDEIESAVKMLLSLKMSYKAAMGE
DYKADCPPRNPAPGSNSGPDATETSEDFVDPWTVRTSSAKGIDYDKLIVQFGSSKIDKEL
INRIERATGQRPHRFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIP
FIFTKWLQDVFNVPLVVQMSDDEKYLWKDLSLDQAYSYTVENAKDIIACGFDINKTFIFS
DLEYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQI
FRDKTDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPN
SSIFLTDTAKQIKTKVNKHAFSGGRDTVEEHRQFGGNCDVDVSFMYLTFFLEDDDRLEQI
RKDYSSGAMLTGELKKALIDVLQPLIAEHQARRKEITDEMVKEFMTPRQLSFHFQSFCFD
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtgcccaatggcgagccctgtgcctctccactggacctgttcaatagcata
gccgctcaaggcgagcttgtgaggaccctcaaagctgaaaaggcatcaaaagatgaaatt
gagtctgcagtaaagatgttattatcattgaaaatgagctacaaagcggccatgggggag
gattacaaggctgactgccccccaaggaacccagcacctgggagtaatagtggcccagat
gccaccgaaaccagcgaggattttgtggacccgtggacagtacggacaagcagtgcaaaa
ggcattgactatgacaagctcattgttcaatttggaagcagtaaaattgacaaagagctg
ataaaccgaatagagagagccactggccagagaccacaccgcttcctgcgcagaggcatc
ttcttctcacacagagatatgaatcaagttctcgatgcctatgaaaataagaagccattt
tatctatacacaggcaggggcccctcttctgaagcaatgcacgtaggtcatctcatcccg
tttattttcaccaagtggctgcaggacgtgttcaacgtgcccttggtggtccagatgtct
gatgatgagaagtacctgtggaaggacctgagcctggaccaggcctactcctacaccgta
gagaacgccaaggacatcatcgcctgcggcttcgacatcaacaagaccttcatcttctct
gaccttgaatacatggggatgagctcaggcttctacaagaatgtggtgaagattcagaag
cacgtcaccttcaaccaagtgaagggcatttttggcttcactgacagtgactgcattggg
aagatcagctttcccgccatccaggccgctccctccttcagcaactcattcccacagatc
ttccgggacaagacggacatccagtgcctcatcccgtgtgccatcgaccaggacccctac
tttagaatgacgagggacgtggccccgcggattggctaccctaaaccagccctgctgcac
tcgaccttcttccctgccctgcagggcgcgcagaccaagatgagcgccagcgaccccaac
tcctccatcttcctcacagacacagccaagcagatcaagaccaaggtcaacaagcatgcg
ttttctggagggagagacactgtggaggaacacaggcagtttgggggcaactgtgatgtg
gacgtgtccttcatgtacctgaccttcttcctggaggatgatgacaggctcgagcagatc
aggaaggattactccagcggggccatgctcactggcgagctcaagaaggctctcatagat
gtcctgcagcccctgatcgccgagcaccaggcccggcgcaaggagatcactgacgagatg
gtgaaagagttcatgactccccggcagctgtccttccacttccaatccttttgttttgac
acttga
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