Sciurus vulgaris (Eurasian red squirrel): 306656306
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Entry
306656306 CDS
T11892
Symbol
MED13, ACX6B4_018738
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform 1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
svul
Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
306656306 (MED13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svul03021
]
306656306 (MED13)
Transcription machinery [BR:
svul03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
306656306 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
306656306
NCBI-ProteinID:
XP_078987464
LinkDB
All DBs
Position
3:35860053..35955210
Genome browser
AA seq
2173 aa
AA seq
DB search
MSSSFVANGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGEDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHITLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCCLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFNSDST
SHHGGKIPRKLANHVVDRVWQECNMNRAQNKRKYSASSGGLCEEETADKVACWDFVESTQ
RTNCSCLRHKNPKSRNSGQQGQAPSLGQQQQVLPKHKTSEKQEKSEKPQKRPLTPFHHRI
SISDDVGMDTDSASQRLVISASDSQVRFSNIRTNDVAKTPQMHGTEMANSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPMEDRIDSLSQSFPSQFQEAVEPTVYI
GTAVNLEEDEANVAWKYYKVPKKKDVEFLPPQLPSDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDELVQQYQMKNQYLSAIASDAEQEPKIDPYAFVEGDEEFLFPDKKDRQNSER
EAGKKHKVEDGTSAVTVLSHEEDAMSLFSPSIKQDAPRPTSHARPPSTSLIYDSDLAVSY
TDLDNLFNSDEDELTPGSKKSANGSDDKASCKESKTGNLDPLSCISTADLHKMYPTPPSL
EQHIMGFSPMNMNNKEYGSMDTTPGGTVLEGNSSSIGAQFKIEVDEGFCSPKPSEIKDFS
YVYKPENCQVLVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLELLSSGPAMPFI
KEGSDGSNMDQEYGPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPR
TPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSE
SVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSG
LFLEDELDIIGRNTDCGKEAEKRFEALRATSTEHVNGGLKESEKFPDELILLLQDQCTNL
FSPFGAADQDPFPKIGVISNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSS
CLHPWSKRNDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGR
GSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENE
ALLNGAKSFFRDLTAIYESCRLGQHRPISRLLTDGIMRVGSTASKKLSEKLVAEWFSQAA
DGNSEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPTNQSLITPPQMTNTGTC
NTPSATLASSASSTITMTSGVAISTSVATANSTLTTTSSSSSSSLNSGISSNKLTSFPPF
GNMNSSGTGSMTTQANTVQSGHLGGQQSSTLQTAGISGEPSSLPTQPHPDVSESTMDRDK
VGIPTDGDSHAITYPPAIVVYIIDPFTYENKDESPNSSNVWTLGLLRCFLEMVQTLPPHI
KSTVSVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPG
LAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQR
WILASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVV
IGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQG
SFVIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENL
DLAFNPNNDGADGMGIFDLLDTGDDLDPDIINILPASPTTSPVHSPGSHYPHGGDAGKGQ
GTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLH
LHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFV
VLNQLYNFIMNML
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttcgtggcgaacggggccagcctggaagattgtcactgtaacctcttc
tgtctggctgacttgacaggaattaaatggaaaagatatgtatggcaaggtccaacttct
gcccctattctgtttccggtgacagaagaagaccccattttgagcagttttagtcgctgt
cttaaggcagatgtacttggtgtttggcgtcgagatcaaagacctggaagaagagagttg
tggatattttggtggggtgaagaccccaattttgctgatcttattcaccatgacttatca
gaagaggaagatggagtgtgggagaatggactttcctatgaatgccgtactctgcttttc
aaagcagttcacaatctgttggaacggtgtctaatgaaccggaactttgtacgtattggc
aagtggtttgtaaagccttatgaaaaagatgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtatatcttctcagtgaagagcacatcacccttgctcagcaatct
aatagcccatttcaagttatcttaagcccatttggactaaatggcactctcacaggacag
gcattcaagatgtctgattcagctacaaaaaaattgattggtgaatggaaacagttctat
cctatttcatgttgcttgaaggagatgtctgaagaaaaacaggaagatatggattgggaa
gatgattctttagctgcagtagaagttcttgttgctggtgttcgaatgatctacccagca
tgctttgttctagtcccccagtcagacattcctacgcctagttctgtgggatcctctcac
tgttcagcttcttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgctatg
tcttcagttactcttacaccacctacgtctcctgaggaagtccaaacggttgatcctcag
tctgcccagaagtgggtcaaattttcttcagtgtctgatggcttcaactctgatagtact
agccaccatggtgggaaaatacccagaaaattagcaaatcatgtggtggatagagtttgg
caagaatgtaatatgaacagagcacagaacaagaggaagtattctgcttcatcaggtggt
ctatgtgaagaagaaactgctgataaagtggcatgctgggattttgttgaatccacacaa
agaacaaattgcagttgtttgaggcacaaaaatcccaaatcaagaaattcgggacaacaa
ggacaggcaccatctttaggtcagcagcaacaagtacttcctaagcacaagaccagtgag
aagcaagaaaagagtgaaaagccacagaaacgccccttgactccttttcaccatcgtata
tctattagtgatgatgttggcatggacacagattcagccagccaaagacttgtaatctct
gcttcagatagtcaagtgagattttcaaacatccgaactaatgatgtagcaaagactcct
cagatgcatggcactgaaatggcaaattcacctcaaccacccccacttagtcctcaccca
tgtgacgtggttgatgaaggagtaactaaaacaccttcaactcctcagagtcagcatttt
tatcaaatgccaacaccggatcccttggttcctactaaaccaatggaagataggatagac
agtttatcccagtctttcccatctcaattccaggaagctgtagagcctacggtatatatt
ggtacagctgtaaacttggaagaagatgaagctaatgtagcctggaagtattacaaggtc
ccaaagaaaaaagatgtagagtttttaccacctcaacttccaagtgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcag
tgtaagaaacctttaaaagtttctgatgaattagttcagcaatatcaaatgaagaatcag
tatctttcagcaatagcatctgatgcagaacaagaacctaaaattgatccatatgcattt
gttgaaggagatgaggaattcctttttcctgataaaaaagatagacaaaatagtgagaga
gaagctgggaaaaaacacaaggtagaagatggaacatctgctgttacagttttatcacat
gaagaagatgctatgtcattatttagtccctctattaagcaagatgctccacgccctact
agtcatgcccgtcctccatcaaccagtttgatttatgactcagacttggctgtctcctat
actgaccttgataatctcttcaattctgatgaagatgaactgacacctggatctaaaaaa
tcagcgaatggatcagatgataaagccagctgcaaagaatcaaagacaggaaatctggat
ccgttatcttgcataagcactgcagatcttcataagatgtatcctacaccaccatcattg
gaacagcatattatgggattttccccaatgaatatgaataataaagaatatggtagtatg
gatacaacacctggaggaactgtcctagaaggaaatagttctagtataggagcacagttc
aaaattgaggttgatgagggtttctgtagcccaaaaccttctgaaattaaagatttttct
tatgtctataagcctgaaaattgtcaagttctagtgggatgttccatgtttgcacctcta
aaaactctaccaagccaatgtctaccccctatcaaattgccagaagaatgtatttaccgc
cagagttggactgttggaaagttggaattgctttcttcagggcctgcgatgccattcatc
aaagaaggtagtgatggaagtaatatggatcaagaatatggccctgcttatacacctcaa
actcatacttcatttgggatgcctcctagcagtgcacctcctagtaacagcggagcagga
attcttccttctccatccacccctaggtttccaactccaaggactccaaggactccaagg
actcctcgtggagctggtgggcctgctagtgctcaaggttcagtcaaatatgaaaattca
gacttgtattcaccagcttccaccccatccacatgcagaccccttaattctgttgaacct
gcaactgttccttccatccctgaagcacacagtctttatgtaaatctcatcctttcagaa
tcagttatgaatttgtttaaagactgtaactttgatagttgctgtatatgtgtctgcaac
atgaatatcaagggtgccgatgttggagtttacattccagatccaacacaggaagcacaa
tataggtgtacctgtggcttcagtgctgtcatgaacagaaaatttggaaacaattcagga
ttatttcttgaagatgaattagatatcataggacgcaacacagactgtggcaaagaagca
gaaaaacgttttgaagctctcagggctacctccactgaacatgttaatggaggtctaaag
gaatctgaaaagtttcctgatgagttgatattattgctacaagatcagtgcactaattta
ttttcaccctttggagcggcagaccaagatcctttccccaaaattggtgtaattagcaat
tgggtgcgggttgaagaacgggactgttgcaatgactgttaccttgcattagaacatggg
cgtcaattcatggataatatgtcaggaggaaaagttgatgaagcacttgtgaaaagttca
tgcttacacccctggtccaaaagaaatgatgtgagtatgcagtgctcacaggatatactt
cgaatgctcctctctcttcagccagttcttcaagatgctattcagaaaaaaagaacagta
agaccttggggggttcaaggtcctctcacttggcaacaatttcataaaatggctggccga
ggctcttatggaaccgacgaatctccagaaccactgccaatccccacgtttttgttgggt
tatgattatgattttttggtgctttctccatttgctctcccttattgggagagacttatg
ctggaaccctatggatctcaaagagatatagcctatgttgtactatgtccagagaatgaa
gctttgttaaatggagccaaaagcttttttagagatcttactgcaatatatgagtcctgt
cgattaggtcaacatagacctatttctcgactgttgacggacggaatcatgagagttgga
tctactgcatcaaagaaactatcagaaaagttggtagcagaatggttttctcaggcagct
gatggtaacagcgaagcattttctaaactcaagctttatgcacaagtctgcagatatgac
ctaggtccttatcttgcttctcagccattggacagctctctactttctcagccaaattta
gttgcccctacaaatcagtctttgattactccacctcagatgacaaatactggaacttgt
aatactccatctgccactttagcatcttcagcaagcagcactataacaatgacttcaggt
gttgccatatctacttcagttgccacagctaattcaactttgaccacaacttcatcttca
tcatcctccagcttgaatagtggaatatcatcaaataaactaacttcatttccacccttt
ggcaatatgaacagtagtggtacaggatccatgaccacacaggcaaatacagttcagagt
ggtcatctaggagggcaacagtcatcaactctacagacagctgggatttctggagagccg
tcgtcacttcccactcagccacatcctgatgtgtctgaaagcacaatggatcgggataaa
gtaggaatccccacagatggtgattcacatgcaattacctatccacctgcaattgttgtt
tatataattgatccttttacatatgaaaataaagatgagagccctaactcttctaatgtg
tggactttggggctacttcgatgctttctggaaatggtccagactcttcctcctcatatc
aagagtactgtttctgtacagattgttccttgtcaatacctgttacaacctgtgaagcat
gaagatagacagatctacacccagcatttaaaatctcttgctttttcggccttcacccaa
tgtcggagaccacttccaacatcaaccaatgtgaaaacactgactggctttggtccaggt
ttagccatggaaactgctcttaaaagtcctgatagaccagagtgtattcgactttataca
cctccttttattctggctccagtaaaggacaaacagacagaactaggagaaacatttgga
gaagctggacagaaatataatgttctttttgtgggctattgtttatcacatgatcaaagg
tggattcttgcatcttgcacagatctatatggagaacttttagaaacttgtatcattaac
attgatgttccaaatagggctcgtcggaaaaagggttctgctaggagatttggtctacag
aaactttgggagtggtgcttaggacttgtacaaatgagttcattgccatggagagttgta
attggtcgtctgggaaggataggtcatggagaattgaaagattggagctgtttgctgagt
cgtcgaaacctgcagtctctaagtaaaaggctcaaagacatgtgtagaatgtgtggtata
tctgctgccgattctcccagcattctcagtgcttgcttagtagcaatggaaccccaaggc
tcttttgttattatgccagattctgtgtcaacaggttctgtatttggaagaagcaccact
ctaaatatgcagacatctcagctaaataccccacaggatacatcatgtactcatatactt
gtgttccctacttctgcttctgtgcaagtagcttcagctacttacaccactgaaaatttg
gatttagctttcaatcccaataatgatggagcagatggaatgggtatctttgatttgtta
gacacaggagatgatcttgatcctgatatcattaatatccttcctgcatctccaactaca
tctcccgtacattctccaggatctcattacccccatggaggtgatgctggcaagggtcag
ggtactgatcggctactttcaacagaatctcatgatgaagtaactaatattcttcagcaa
ccattggcccttggatacttcgtatcaactgccaaagcgggtccattacctgactggttc
tggtcagcatgtcctcaagcacaatatcagtgtcccctttttcttaaggcctctttgcac
ctccacgtgccttcagtgcaatctgacgagctgcttcacagtaaacactcccacccactt
gactcaaatcagacttcagatgtcctcaggtttgttttggaacagtacaatgcactctcc
tggctaacctgtgaccctgcaatccaggacagacgctcatgtctcccaattcattttgtg
gtgctgaatcagttatacaactttatcatgaatatgctgtga
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