KEGG   Sciurus vulgaris (Eurasian red squirrel): 306656972
Entry
306656972         CDS       T11892                                 
Symbol
COL4A3, ACX6B4_019404
Name
(RefSeq) collagen alpha-3(IV) chain isoform 1
  KO
K06237  collagen type IV alpha
Organism
svul  Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04151  PI3K-Akt signaling pathway
svul04382  Cornified envelope formation
svul04510  Focal adhesion
svul04512  ECM-receptor interaction
svul04518  Integrin signaling
svul04820  Cytoskeleton in muscle cells
svul04926  Relaxin signaling pathway
svul04933  AGE-RAGE signaling pathway in diabetic complications
svul04974  Protein digestion and absorption
svul05146  Amoebiasis
svul05165  Human papillomavirus infection
svul05200  Pathways in cancer
svul05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:svul00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    306656972 (COL4A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    306656972 (COL4A3)
   04518 Integrin signaling
    306656972 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    306656972 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    306656972 (COL4A3)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    306656972 (COL4A3)
  09154 Digestive system
   04974 Protein digestion and absorption
    306656972 (COL4A3)
  09158 Development and regeneration
   04382 Cornified envelope formation
    306656972 (COL4A3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    306656972 (COL4A3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    306656972 (COL4A3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    306656972 (COL4A3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    306656972 (COL4A3)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    306656972 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svul04147]
    306656972 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:svul00536]
    306656972 (COL4A3)
Exosome [BR:svul04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   306656972 (COL4A3)
Glycosaminoglycan binding proteins [BR:svul00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   306656972 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 306656972
NCBI-ProteinID: XP_078988737
LinkDB
Position
3:178023396..178167481
AA seq 1670 aa
MRLGSLRRPPALLLRLLLVLLAAAPAASKGCVCKDKGQCFCDGVKGEKGEKGFPGPPGSP
GQKGFPGPEGLPGPQGPKGCPGRPGLTGLKGVRGITGLPGFSGPPGLPGIPGHPGPYGLA
GLPGCNGSKGDRGFPGLPGTPGYPGVPGAPGLKGQKGAPAKGEDRELSGRGDPGLPGPPG
FQGLPGPPGFPGPTGPPGPPGFLGFPGASGPRGPKGHMGDNVIGQKGEQGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPPGPPGESYGSAKGAPGEPGSQGKPG
KGGAPGFPGTEGAKGNRGFPGLRGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDEGIPG
PPGPKGTRGPQGPHGPPGVPGSPGSSSPGLRGAPGWPGSKGSKGERGPPGKATVGLPGAP
GCPGSPGSAGSPGPPGPPGDTIFRKGPPGDHGLPGHLGPPGVPGVDGSKGEPGLLCIECP
YIPGPPGLPGVPGLDGVKGIPGGRGVTGVKGSPGSPGSAGLPGFPGFPGAQGDPGLKGRK
GETSQPRGPVGAPGDPGLRGQPGRKGLDGIPGTPGAKGLPGPRGEPALSGEKGDQGPPGD
PGSPGSPGSAGPAGPPGYGPQGEPGPKGTQGIPGAPGPPGEAGPKGESSVSTPVPGPPGP
PGRPGHAGPPGLPGIPGSMGKCNPGLPGPDGEPGLPGIGFPGPPGPKGDQGFPGTKGSPG
CPGKMGEPGLAGQPGFPGAKGEPALARPGEPGKPGFPGERGNSGENGEIGLPGLPGLPGI
PGKEGLDGPRGDPGQPGPPGERGPPGRCLEGPRGAQGLPGLNGLQGQPGRRGGTGPKGDP
GIPGLDRSGFPGEHGQPGKPGHPGEMGPPGHKGYPGTPGFLGPPGGRGMVGMMGHPGATG
PPGPPGNPGIQGQKGSLGIPGIKGERGPPGARGEQGDKGNQGPSQIVHLMGDKGEPGPKG
FTGNPGEKGNRGIPGFPGLKGHEGPSGPPGPPGPRGDPGSPGNPGEPGPRGVPGSMGNMG
VPGSKGKRGPLGLPGLAGRPGFPGTHGLQGDKGEPGYSKDTKPGPPGPKGDPGLPGDVGK
KGERGPPGLPGTSGPAGPEGAPGSPGNPGHPGKPGPDGDFGLKGIKGFPGHPGVKGPPGL
PGFPGLPGPIGVRGNQGHDGIPGPAGEKGETGLLRAHPGPRGNPGAPGAKGDRGAPGWPG
LPGRKGTMGDVGPQGPLGIRGPPGPPGQPGAIIPGQKGNRGPPGSRGNPGDPGPPGPPGS
HVKGIKGDKGFMGQPGPKGPPGTIGDTGPPGHPGAPGTPGLPGLRGDPGFHGFPGMKGEK
GDPGFLGTVGPPGPIGPRGPPGARGHPGTLKVISLPGSPGPPGPPGQPGMQGDPGPVGSP
GNPGPCGPRGKPGKDGKPGTPGPPGEKGHKGHKGEPGPPGSDGLPGLKGKPGDAGLPATE
TRRRGFVFTRHSQATKIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCDINEICNFASRNDYSYWLSTPALMPMDMTPITGRALEPFISRCTVCEGPAMTIAV
HSQTTTIPPCPHGWVSLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRANPFIECHGRG
TCNYYSNSYSFWLASLNPERMFRKPVPSTVKAGELEKIISRCRVCMKKRH
NT seq 5013 nt   +upstreamnt  +downstreamnt
atgcgcctcgggtccttgcggaggccgccggccctcctccttcgactcctgctggtgctc
ctggcggccgcgcctgcggcgagcaagggctgcgtctgtaaagacaaaggccagtgcttc
tgtgatggggtcaaaggggaaaagggggagaaaggctttcctggaccccctggttctcct
ggccagaaaggatttccaggtcctgaaggcttgcctggaccacagggacccaagggttgt
ccaggacgtccaggactcactggtctcaaaggtgtaaggggaataactggattaccagga
ttttcaggccctcctggacttccaggcatcccaggtcatcctgggccttatggacttgct
ggtttgccagggtgcaatggctccaagggggaccgaggatttccaggacttccagggaca
ccaggctacccaggggtcccaggtgctcctggcctgaaaggacaaaagggtgctcctgct
aaaggagaagatagagaactcagtggaagaggtgaccctgggctgccaggacccccagga
ttccagggtttgccaggccccccaggttttccgggacctacgggcccacctggccctcca
ggattccttggctttccaggagcttcaggacctagaggacctaagggtcacatgggcgat
aatgtgatagggcaaaaaggagaacagggtgtgaaaggattaacaggaccccctggacca
ccaggaacagttattgtgacgctaactggcccagacaacagaacggacctcaagggtgag
aagggagacaaaggagccatgggagaacccggaccccccggacccccaggaccacctgga
gaatcatacggatctgcaaaaggtgctcctggagaacctggctcacagggaaaacctgga
aaaggtggtgcccctggcttccctggcactgagggagccaagggcaacaggggcttccct
gggttaaggggtgaagatggcattaagggatggaaaggggacattggccctccaggattt
cgtggtccaacagaatattatgatgcataccaggaaaagggagatgaaggaattccaggc
ccaccaggacccaaaggaactcgtggtccacagggtccccatggtccccctggagttcct
ggaagtcctggatcatcaagtcctggcctcagaggagcccctgggtggcctggctcgaaa
ggaagcaaaggggagcgaggccccccaggaaaggccacagtggggctccctggggcccct
ggctgtcctggttcaccaggctctgcagggtcaccaggacctccaggacctccaggtgac
accatttttcgcaagggtccacctggtgatcatggcctgccaggtcatctagggcctccg
ggagtcccaggagtcgatggatccaaaggagaaccaggcctgctgtgcatagagtgcccc
tatattccagggccccctggcctcccaggagtgccagggctggatggtgtcaaaggaatc
ccaggaggacgaggtgtgactggagtgaaaggaagcccagggtccccaggaagtgcaggt
cttccaggatttccaggattcccaggagcccagggagatcctggacttaaaggaagaaaa
ggtgaaacatctcagccccggggaccagtgggcgccccaggggatcccggactcagaggg
caaccagggagaaagggcttggatggaattcccggaactccaggagctaaaggattacca
ggacctcgaggagaaccggccttgagtggtgagaagggggaccagggtcctccaggggat
ccgggttcccctgggtccccaggatctgcaggacctgctggaccacctggctatggaccc
cagggagagccaggtccaaagggcacccaaggaattcctggagcccctggaccacctgga
gaagccggtcctaagggagaatccagtgtttcaacaccggtcccaggccccccaggacct
ccagggcgccctggccatgctggtcccccaggtctgcctggtatccctggctccatgggg
aaatgtaatcctggtcttcctggacctgatggtgaaccaggacttccaggaattggattt
cctggacctcccggacctaagggagatcaaggttttccaggaacaaaaggatcaccaggt
tgtcctgggaaaatgggagagcccgggttagctggacagccaggcttcccaggagccaag
ggagaaccagcactagccaggcctggagaaccaggaaaaccaggttttccaggagaaaga
ggcaattctggggaaaatggagaaattggactccctggacttccaggtctccctggaatt
ccaggaaaagaagggcttgatggaccacgaggagatccagggcagcccgggccacctgga
gaaagaggacctccaggaaggtgcctagagggccccagaggagcccaaggacttccaggt
ctaaatggattgcaagggcaaccaggcagaagaggaggaacagggccaaagggagaccca
ggcattccaggcttggataggtcaggattccctggagaacatggccaaccaggaaaacca
ggtcatccaggtgagatgggaccacctggtcacaaaggatatccaggaactcccggattt
ttaggaccaccaggcggaaggggcatggttgggatgatgggccatcctggagccactggc
cctcctgggcctcctgggaacccaggcatacaggggcagaagggtagcctcggaatacca
ggaataaagggtgagagaggaccccctggagccagaggggagcaaggagataaaggaaac
cagggtccttcacaaatagtccacttaatgggagacaaaggagaaccagggcccaagggg
tttacaggaaatccaggtgagaaaggaaacagaggcattccagggtttccaggtttaaaa
ggccatgaaggaccatctggacccccaggaccaccaggccctcggggagatccaggaagc
cctgggaatcctggagaaccaggaccacgtggtgtgccaggaagcatggggaacatgggt
gtgccaggttctaaaggaaaaagaggacctttaggacttccaggtcttgctggaagacca
ggcttcccaggtactcatggtctccaaggagataagggagaaccaggttactcaaaagac
acaaagccaggaccaccaggaccaaagggggatccaggattgccaggtgacgtgggaaag
aaaggagaaagagggccccctggcctgcctggaacatcagggcctgctggacctgaggga
gcccccggaagtccaggaaatcctggccacccaggaaagccaggtcctgatggtgacttt
ggacttaaaggaatcaaaggtttcccaggccatccaggagtaaaaggccctccaggtctt
ccaggattcccaggacttcctggaccaataggtgtaagaggtaaccaaggacatgatgga
attcctggtccagctggagaaaaaggagaaacaggcttgctgagggcccatccaggtcca
cgagggaacccaggtgctccaggtgccaagggagacaggggagcccctggctggcctggc
cttcctggcaggaagggaaccatgggagatgttgggcctcaaggaccccttggcataaga
ggacccccagggccaccaggtcagcctggggcaatcatccctggccagaaaggaaatcgt
ggtccaccaggttcaagaggaaatccaggtgatccaggtccccccggacctccagggagt
catgtaaaaggcataaaaggtgacaaaggatttatgggccagcctggcccaaaaggtcca
cctggaactataggggatacagggccaccaggtcatccgggagcaccaggtaccccaggt
cttccagggctcagaggtgatcctgggttccatggatttccaggcatgaaaggagagaag
ggtgatccaggatttctgggaacagttggacctccaggaccaattgggccaagaggacca
cctggtgcacgtggacatcctggcacacttaaggtcatctcccttccaggaagcccaggg
ccacctggcccacctggacaaccagggatgcaaggagaccctgggccagtggggtcacca
ggaaacccaggaccctgtgggccaagaggtaaacctggcaaggatggaaaaccaggaact
cccggaccacctggagaaaaaggccacaaaggccacaaaggagagccaggaccacctgga
tcagatggattgccaggcttgaagggaaaacccggagatgctggcttgcctgcaaccgag
acaaggaggaggggctttgtcttcacgcgtcacagtcaagcgacaaagatcccctcatgt
ccagaagggacagagcctctctacagtgggttttctcttctctttgtacaagggaatgag
caagcccatggacaagaccttggaactcttgggagctgtctgcagcgatttaccacgatg
ccattcttattctgtgacatcaatgaaatatgtaattttgcatctcggaatgattattca
tactggctgtcaacaccagctctgatgccaatggacatgactccaattactggcagagcc
ctggagccttttattagcagatgcaccgtttgtgaaggtcctgcgatgaccatagctgtt
cacagccaaaccaccaccatccccccatgtccccatggctgggtttccctgtggaaagga
ttttctttcatcatgttcacaagtgcaggttctgagggcgctgggcaagcactggcatcc
cctggctcctgcttggaggaattccgagccaatccgtttatagaatgtcatggaagagga
acatgcaactactattcaaattcctacagtttctggttggcttcattaaacccagaaaga
atgttcagaaaacctgttccatcaactgtgaaagctggggagttagaaaaaataataagt
cgctgtcgggtgtgcatgaagaaaagacactga

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