Sciurus vulgaris (Eurasian red squirrel): 306657269
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Entry
306657269 CDS
T11892
Symbol
SUPT6H, ACX6B4_019701
Name
(RefSeq) transcription elongation factor SPT6 isoform 1
KO
K11292
transcription elongation factor SPT6
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svul03021
]
306657269 (SUPT6H)
03036 Chromosome and associated proteins [BR:
svul03036
]
306657269 (SUPT6H)
Transcription machinery [BR:
svul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
306657269 (SUPT6H)
Chromosome and associated proteins [BR:
svul03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
306657269 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
306657269
NCBI-ProteinID:
XP_078989224
LinkDB
All DBs
Position
3:complement(66544059..66576795)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDDGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPRMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLVDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQTQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaggctgaggagtcagaagaagaatacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaagaggaggatgatgatgaggaggag
gaggaggagaatctagatgatcaagatgaacaaggcaatttgaaaggctttatcaatgat
gatgatgatgaagatgatggggaagaggatgaaggcagtgactctggtgattccgaagat
gatgttggccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtgaaacgaggccaaaagtaccggcgc
gtcaaaaaaatgtcagatgatgaggatgatgacgaagaggaatatggcaaggaagaacat
gaaaaagaggctattgcagaagaaatattccaggatggggaaggggaagaaggacaggaa
gctgtggaggcccccatggctcctccagaggaggaagaagaagatgatgaagagtcagat
attgatgatttcattgtggatgatgatggacagcctctgaaaaaacccaagtggcggaaa
aaacttcccggatacacagatgcagccctgcaagaagcccaggagatttttggtgtggat
ttcgattatgatgaatttgagaaatacaatgagtatgatgaagaacttgaggaagagtat
gagtatgaggatgatgaggccgaaggtgaaatcagagtgcgccccaagaagaccaccaag
aagcgtgtgagccgcaggagcatctttgagatgtacgagcccagtgagctggaaagcagc
cacctcacagatcaggacaacgaaatccgagccactgacctgcctgagaggttccagctc
cgctccatcccagtcaagggggctgaagatgatgaattagaagaagaagctgactggatc
tacaggaatgcctttgcaacaccaaccatttctctacaggaaagctgtgattacctagac
agagggcagccaaccagcagcttcagtcgaaaagggcccagtacaattcagaagattaaa
gaagccctgggcttcatgcgaaatcagcattttgaggtgccttttattgccttctaccga
aaggagtatgtggagcctgagttgcacatcaatgacctgtggagagtgtggcagtgggat
gaaaagtggacccagttgaggatccgcaaagagaacctaacacgactgtttgagaagatg
caagcttatcaatatgagcaaatctctgctgaccctgacaaacctcttgctgatggcatc
cgggctctggacaccactgacatggagaggctcaaggatgtacaatcaatggatgagtta
aaagatgtctataatcatttcctgctttactatggccgtgatatccccaggatgcagaat
gctgccaaggctagccgcaagaagctaaagcgtgtaagggaagagggagatgaagaaggt
gaaggtgaagaggccgaagacgaggagcagaggggtccagagctcaagcaggcttcccgc
cgagacatgtataccatttgccaaagcgcagggctagatggcctggccaaaaagtttgga
cttactcctgagcaatttggggagaacctccgggacagctaccaacggcatgagacagag
cagttccccgcagagcctttggagctggccaaagattatgtttgcagccagtttcctact
ccagaagccgtgctggaaggtgcccgctacatggtagcactacagattgcacgtgagccc
cttgtccggcaggtgctgaggcaaaccttccaggagagagccaagctaaatataacccct
accaagaaaggtagaaaggatgtggatgaggcccattacgcttattcctttaagtactta
aagaacaagcctgttaaagaactgagagatgaccagttcctcaagataggcctggcagaa
gatgaagggctactcaccattgacatcagcatagatatgaagggagtagaaggctatggc
aatgaccagacatactttgaagagattaaacagttttactaccgagatgagttcagccac
caggttcaggagtggaaccggcaacgcaccatggccattgaacgagcattacagcagttc
ctctatgtgcagatggctaaggagctcaagaataagctgctagctgaggccaaggaatat
gtcataaaggcctgtagccgaaagctctacaactggttgagagtggcgccctaccgacca
gatcagcaggtagaggaagatgatgacttcatggatgagaaccaagggaaaggcattaga
gttctaggcattgctttctcctctgccagagatcaccctgtgttctgtgctctggtcaat
ggtgaaggagaagtgacagacttcctccggctgccccattttaccaaacggcgaactgcc
tggagagaggaagagcgggaaaagaaggctcaagacattgaaacccttaagaaatttctt
ctgaacaagaagcctcatgtggtgacagttgcaggagagaacagggatgcccaaatgttg
attgaggatgtgaagcgcattgtgcatgagctggaccagggccaacaactgtcttctatt
ggggtggagctggttgacaacgaattggccattctctatatgaacagcaagaagtcagag
gcagagttccgggattaccctcctgtactgagacaggcggtctctctggctcggcgcatc
caagaccctctgatagaatttgctcaagtgtgcagctctgatgaagacatactgtgtctc
aagtttcaccccttgcaggaacatgttgtgaaagaggaactgctgaacgccttgtactgt
gaatttatcaaccgggtcaatgaagtcggggtcgatgtcaaccgtgccattgcacatcct
tacagccaggctttgatccagtatgtctgtggcctgggacctcgtaaagggactcatctc
ctgaagatcctgaagcagaacaatacgcgccttgaaagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacacagcc
tccctgggggacagcactgactcatacattgaagtccttgatggttctcgtgttcaccct
gagacctatgagtgggccaggaagatggccgtagatgccctagaatacgatgaatcagct
gaggatgccaatcctgcaggagcccttgaagaaatcttggaaaatccagagcgactcaaa
gacctggacctcgatgcctttgcagaagagctggagagacagggctacggcgacaaacac
atcacattatatgacatccgggcagagctaagctgtcggtataaggacctccgaacagcc
taccgctctcccaacacagaagagatcttcaatatgttaaccaaagaaacaccagagact
ttctatattggaaagctcatcatctgcaatgtcactggcattgctcacaggcgtccacag
ggtgaaagctatgaccaggccatccgcaatgatgagacaggactgtggcagtgccccttc
tgtcagcaggacaatttccctgaactaagcgaggtctggaaccactttgacagtggttca
tgcccaggccaggccattggtgtcaaaacacggctagacaatggtgtcactggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggagcgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacattgagaagttcagtgcagacttgacc
tgccgtacctcggaccttgtggacaggaacaatgagtggaaactgcccaaggacacttat
tatgactttgatgctgaagcagcagaccacaagcaagaggaggacatgaaacggaagcag
caacggaccacatacatcaagcgagtgattgcacacccatctttccataatatcaatttc
aaacaagcagaaaagatgatggagaccatggatcagggtgatgtgatcatccggcctagc
agcaagggtgagaaccacctgacagtgacctggaaagtcagtgatggcatctaccagcat
gtggatgtgcgggaggagggcaaggaaaatgccttcagccttggagccactctgtggatc
aacagtgaggaatttgaagacttggatgagattgttgcccgctatgtccagcccatggcg
tcctttgcccgggaccttcttaaccacaagtattaccaggattgcagtggtggggaccgc
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactcctgaaggattccggtaccgagggcaaatt
ttcccaactgtgaatggactcttcagatggtttaaggatcattaccaggatcctgtacca
ggtatcaccccaagtagcagcagcagaacaaggacacctgcctctatcaatgctacccct
gccaacatcaaccttgcagatctgacacgagctgtgaatgccctgccccagaacatgact
tcgcagatgttcagtgccattgctgctgtgacaggacagggacagaaccctaatgccacc
ccagcccagtgggcctccagccagtatggctatggaggcagtggagggggcagcagcgct
taccatgtattcccaacaccagctcagcagccagtggccacaccactaatgacccccagc
tactcctacacaaccccgagccaacccatcaccacaccacagtaccaccagctccaggcc
agcaccaccccacagtctgcccagacccagccccagccctcttccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcagagcag
tggctacaggagaaggaagcagaacggcggaaacagaagcagcggttgacacctcggccc
tccccaagtcccatgatagaaagcacccccatgtccattgctggcgatgccaccccactc
ctggacgagatggatcgatag
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integrated database retrieval system
