Sciurus vulgaris (Eurasian red squirrel): 306657352
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Entry
306657352 CDS
T11892
Symbol
DDX18, ACX6B4_019784
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svul03041
]
306657352 (DDX18)
03009 Ribosome biogenesis [BR:
svul03009
]
306657352 (DDX18)
Enzymes [BR:
svul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
306657352 (DDX18)
Spliceosome [BR:
svul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
306657352 (DDX18)
Ribosome biogenesis [BR:
svul03009
]
Eukaryotic type
90S particles
Helicases
306657352 (DDX18)
Pre-60S particles
306657352 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
306657352
NCBI-ProteinID:
XP_078989400
LinkDB
All DBs
Position
3:complement(83761444..83777151)
Genome browser
AA seq
694 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQRASDVSLSETQNGDMPEETLKVRKVKKSLKRS
VTVGLPEVQNGDMSEEKVENIKVKKSLKHSVNVSLSEAQNGDKSEEIVENVKVKKSPQKS
TILTNGEATTQSPNSETKKKKKKKKRKMVNDAGPDAKKVKVEEGTEAHEETENSVEKPVD
EEEDSEVPSLPLGLTGAFEDTSFASLTNLVNENTLKAIKEMGFMNMTEIQHKSIRPLLEG
RDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTGALILSPTRELAMQTFGVLKELMT
HHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEAD
RILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANAT
VDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIH
GRQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRT
ARGLNGRGHALLILRPEELGFLRYLKQSKVPLNEFDFSWSKISDIQSQLEKLIEKNYFLH
KSAQEAYKSYIRAYDSHSLKQIFDVNNLNLPQVALSFGFKVPPFVDLNVNSSEGKRKKRG
GGGGFGYQKTKKVEKSRIFKNISKKSSDSRQFSH
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacctgcccatgaaacttctgcgtaagaagattgagaagcggaacctcaaattg
aggcagcgaaacctaaagttgcaaagggcctcagatgtgagcctatcagaaactcaaaat
ggtgacatgcctgaagaaacactgaaagtcagaaaagtaaaaaaatccctgaagcgttct
gtgactgtaggcttgccagaagtgcaaaatggagatatgtctgaagaaaaagtggaaaat
ataaaagttaaaaaatccctgaagcattctgtgaatgtgagcttgtcagaagcacaaaat
ggagataagtctgaagaaatagtagaaaatgtaaaagttaaaaaatccccccagaaatct
accatattaaccaatggagaagcaacaacacagtcccccaattcagaaacaaaaaagaaa
aagaagaagaaaaagagaaaaatggtgaatgatgctgggcctgatgcaaaaaaagtaaaa
gttgaagaaggcactgaagctcatgaagaaacagaaaacagtgtggaaaagccagttgat
gaggaagaagacagtgaagtacccagcctgcccctgggactgacaggagcttttgaggat
acttcatttgcttctctaactaatcttgtcaatgaaaacactctgaaggcaataaaagaa
atgggcttcatgaacatgactgaaattcaacataaaagtattaggccacttctggaaggc
agggatcttttagcagctgcaaaaacgggaagtggtaaaacccttgcatttctcatccct
gtgattgaactcattgttaagttaaagttcatgcccaggaacggaacaggagcccttatt
ctctcacctactagagaattagccatgcagactttcggtgttcttaaggagctgatgact
caccacgttcacacatatgggttgatcatgggtggcagtaacagatctgctgaagcacag
aaacttgctaatggtatcaacatcattgtggcaacaccaggccggctcctggaccatatg
cagaataccccaggttttatgtataaaaacctacaatgtctggttatcgatgaggctgat
cgtatcttggatgttgggtttgaagaagaattaaagcaaattattaaacttctgccaaca
cgcagacagaccatgctcttttctgccacacaaactcggaaagttgaagacctggcaagg
atttctttgaaaaaggaaccattgtatgttggtgttgatgatgataaagctaatgcaaca
gtggatggtcttgagcagggatatgttgtttgtccctctgaaaagagatttcttctgctc
tttaccttccttaagaagaatcgaaaaaagaaactcatggtcttcttttcgtcttgtaag
tctgtaaaataccactacgagttgctgaactacatcgatttacctgtcttggccattcat
ggaaggcagaagcaaaataagcgtaccaccacattcttccagttctgcaatgcagattca
gggatattattgtgtacagatgtggcagcaagagggttggatattcctgaagttgactgg
attgttcagtatgaccctccagatgaccctaaggaatatattcatcgtgtgggtagaaca
gccagaggtctaaatggaagagggcatgccttgctcattttgcgcccagaagaattgggt
ttccttcgttacttgaagcaatccaaggttccattaaatgaatttgacttttcctggtcc
aaaatttctgacattcagtctcagcttgaaaaattgattgaaaagaactactttcttcat
aagtcagcccaggaagcatacaagtcctacatacgagcatatgattctcattctctgaaa
cagatctttgatgttaataacttaaatttgcctcaggttgccctatcatttggtttcaag
gtgcctccttttgttgatctgaatgtgaacagcagtgagggcaagcgtaaaaagagagga
ggcggcggtggatttggctatcagaaaaccaagaaagttgagaagtccagaatcttcaaa
aatattagcaagaaatcatcggacagccggcagttctctcactaa
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