Sciurus vulgaris (Eurasian red squirrel): 306657497
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Entry
306657497 CDS
T11892
Symbol
NLE1, ACX6B4_019929
Name
(RefSeq) notchless protein homolog 1 isoform 1
KO
K14855
ribosome assembly protein 4
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svul03009
]
306657497 (NLE1)
Ribosome biogenesis [BR:
svul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
306657497 (NLE1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
DSE1_N
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EML
ASA1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR41
NLE
CFAP251_N
Beta-prop_VPS8
PAC11
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_SPT8
eIF2A
Tricorn_2nd
TRM82_WD
RMC1_N
Beta-prop_RIG_1st
Ge1_WD40
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
PD40
Beta-prop_NWD2_C
Cytochrom_D1
DNAI3_WD
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
306657497
NCBI-ProteinID:
XP_078989685
LinkDB
All DBs
Position
3:39625945..39634824
Genome browser
AA seq
485 aa
AA seq
DB search
MAVVAADETAAPDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPL
AFYVHDAEIVSSLGKTLESQAVETEKILDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISV
AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQI
LLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCER
ILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA
LRTGAFEPAEATVNAQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAE
DKKPLARMTGHQALINQVLFSPDSRMVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI
AWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCL
RIWRR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagcggcggacgagacggcggcgcccgatgtgcagcggctgctagtgcag
ttccaggatgagggtgggcagctgctgggctcgccgttcgacgtgcccgtggacatcact
cccgacaagttgcagctggtgtgcaacgcgctgctggcgcaggaggatcccctgcccctg
gctttctatgtccatgatgcagaaatcgtctcctcactggggaagacactggagtcccag
gcagtggagacagagaagatcctagacatcatctaccagccacaggccatcttcagggtc
cgagctgtgactcgctgcaccagctccttggagggtcacagtgaagcagtcatttctgtg
gcctttagccccacaggaaaatacttggcaagtggctccggagacaccactgtgcgcttc
tgggatctcagtacagagacaccacatttcacatgcaagggacaccgacactgggtcctt
agcatatcctggtccccagatggcaagaagctagcctcaggctgcaagaacggccagatt
ctcctctgggacccaagcacggggaagcaggtgggccggacccttgccggccacagcaag
tggattacaggcctgagttgggagcccctccatgcgaaccctgagtgtcgctatgtggcc
agcagctccaaggacggcagtgtgcgggtctgggacacaactgcaggccgctgtgagcgc
atcctcactgggcacacacagtcggtcacctgtctccggtggggaggagacgggcttctg
tactccgcgtctcaggaccgcaccatcaaagtctggagggcccatgatggtgtgctatgc
cggactcttcaaggccatggccactgggtgaataccatggcactcagcaccgactatgcc
ctgcgcacaggagcctttgaacctgccgaggccacggttaatgcccaagacctgcagggg
tccttgcaggagctgaaggaaagggccctgagccggtacaacctcgtgcggggccaaggc
ccagagaggctggtgtctggctcagacgacttcaccttattcctgtggtccccagcagag
gacaagaagccccttgcacggatgacgggacaccaggccctcatcaatcaggtgctcttc
tctcctgactcccgcatggtggccagtgcctccttcgacaagtccatcaagctgtgggat
ggcaggactggcaagtacctggcttccctgcgtggccatgtggctgctgtgtaccagatt
gcatggtcagctgacagccggttgctggtcagcggtagcagtgacagcacactgaaggtg
tgggacgtgaaggcccagaagctggccacagacctgccaggccatgctgatgaggtatat
gctgttgactggagtccagatggccagagagtggcaagtggtgggaaggacaaatgcctc
cggatatggaggagatga
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