Sciurus vulgaris (Eurasian red squirrel): 306657604
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Entry
306657604 CDS
T11892
Symbol
ALYREF, ACX6B4_020036
Name
(RefSeq) THO complex subunit 4 isoform 1
KO
K12881
THO complex subunit 4
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03013
Nucleocytoplasmic transport
svul03015
mRNA surveillance pathway
svul03040
Spliceosome
svul05014
Amyotrophic lateral sclerosis
svul05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
306657604 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
306657604 (ALYREF)
03015 mRNA surveillance pathway
306657604 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
306657604 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
306657604 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svul03019
]
306657604 (ALYREF)
03041 Spliceosome [BR:
svul03041
]
306657604 (ALYREF)
Messenger RNA biogenesis [BR:
svul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
306657604 (ALYREF)
TREX complex
306657604 (ALYREF)
Spliceosome [BR:
svul03041
]
Complex C
Other components
EJC/TREX
306657604 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
306657604 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
306657604
NCBI-ProteinID:
XP_078989857
LinkDB
All DBs
Position
3:1123698..1130435
Genome browser
AA seq
256 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGLMRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPVQSINRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAE
ELDAQLDAYNARMDTS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggtggccgcggcgggggccggggccgcggcagggccggctcccagggcggccgtggcggc
ggggcgcaggccgctgcgcgggtgaatcgaggcggcggactcatgcggaaccggccggcc
atcgcccgcggcgctgcgggcggcggcggcaggaaccggccggcgccctatagcaggccg
aaacagcttcccgacaagtggcagcacgacctgttcgacagcggcttcgggggcggtgcc
ggcgtggagacgggtgggaagctgctggtgtcaaatctggatttcggagtgtcagacgcc
gacattcaggaactctttgctgaatttggaacgctgaagaaggcggctgtgcactatgat
cgctctggccgcagcttagggacagcagatgtgcactttgaacggaaagcagatgccctg
aaggctatgaaacagtacaacggtgtccctttggatggccgccccatgaacatccagctt
gtcacatcacagattgacacacagcggagacctgtacagagcataaacagaggtggcatg
actagaaaccgtggctccggaggttttggtggtggtggcacccggagagggacccgtgga
ggtagccggggaagaggcagaggtaccggcaggaactcaaagcaacagctctctgcggag
gagctggacgcacagctggatgcctataatgcgaggatggacaccagttaa
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integrated database retrieval system
