KEGG   Sciurus vulgaris (Eurasian red squirrel): 306659951
Entry
306659951         CDS       T11892                                 
Symbol
BTRC, ACX6B4_022383
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform 1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
svul  Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul04114  Oocyte meiosis
svul04120  Ubiquitin mediated proteolysis
svul04218  Cellular senescence
svul04310  Wnt signaling pathway
svul04340  Hedgehog signaling pathway
svul04390  Hippo signaling pathway
svul04710  Circadian rhythm
svul05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:svul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    306659951 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    306659951 (BTRC)
   04340 Hedgehog signaling pathway
    306659951 (BTRC)
   04390 Hippo signaling pathway
    306659951 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    306659951 (BTRC)
   04218 Cellular senescence
    306659951 (BTRC)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    306659951 (BTRC)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    306659951 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svul04121]
    306659951 (BTRC)
   03036 Chromosome and associated proteins [BR:svul03036]
    306659951 (BTRC)
Ubiquitin system [BR:svul04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     306659951 (BTRC)
Chromosome and associated proteins [BR:svul03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     306659951 (BTRC)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd DSE1_N WD40_MABP1-WDR62_2nd EIF3I WD40_Gbeta Beta-TrCP_D WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd F-box-like Beta-prop_EIPR1 CFAP251_N Beta-prop_RIG_2nd Beta-prop_Aladin WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st PAC11 ASA1 Beta-prop_SPT8 Beta-prop_IP5PC_F TRM82_WD Beta-prop_DCAF12 NBCH_WD40 Beta-prop_DCAF4 F-box Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_like Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_WDR11_2nd Beta-prop_Nup120_160 F-box_5 WD40_2 Aq_678 DUF4508 MTUS1_CCDC69_CC1 DUF6188
Other DBs
NCBI-GeneID: 306659951
NCBI-ProteinID: XP_078994082
LinkDB
Position
4:complement(27493618..27670551)
AA seq 605 aa
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNNCARLCLNQETVCLASTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPATQAEPPRSPSRTY
TYISR
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggacccggccgaggcggtgctgcaggagaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacttat
aacaactgtgccagactctgcttaaaccaagaaacagtatgtctagcaagtactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatgattgta
cccaagcaacggaaactctctgcaagctatgaaaaagaaaaggaactgtgtgtcaaatat
tttgagcagtggtcagagtccgatcaagttgaatttgtggaacatcttatatcccaaatg
tgtcattaccaacatgggcacataaactcatatcttaaacctatgctacaaagggatttc
atcactgctctgccagctcggggattggatcatattgctgagaacattctgtcatacttg
gatgccaaatcactctgtgctgctgaacttgtgtgcaaagaatggtaccgagtgacgtcg
gatggcatgttatggaagaagctcatcgagagaatggtcaggacagattctctgtggaga
ggcctggcagaacgaagagggtggggacagtatttattcaaaaacaaacctcctgatggg
aatgctcctcccaactctttttatagagcactttatcctaaaattatacaagacattgag
acaatagaatctaattggagatgtggaagacatagtttacagagaatccactgccggagt
gaaacaagcaaaggagtttactgtttacagtatgatgaccagaaaatagtaagcggcctt
cgagacaacacaatcaagatctgggataaaagcacactggaatgtaaacgaattctcaca
ggccacacaggttctgtcctgtgtctccagtatgacgagagggtgatcataactggatcg
tcggattccactgtcagagtatgggatgtaaatacaggtgaaatgctaaacacgttgatt
caccattgtgaagcagttctgcacttacgtttcaataatggcatgatggtgacctgctcc
aaagatcgttccattgctgtgtgggatatggcctccccaactgatattaccctccggagg
gttctggttggacaccgagctgctgtcaatgttgtagactttgatgacaagtatatcgtt
tctgcatctggggacagaactataaaggtgtggaacacaagtacttgtgaatttgtaagg
accctaaatggacacaaacgagggattgcctgtttgcagtacagagacaggctggtggtg
agtggctcatctgacaacactatcagattatgggacattgaatgtggtgcatgtttacga
gtgttagaaggtcatgaggaattggtgcgttgtattcggtttgataacaagaggatagtt
agtggggcctatgatggaaaaattaaagtgtgggatcttgtggctgctttggaccctcgt
gctcctgcagggactctctgtctacggacccttgtggagcattctggaagagttttccga
ctccagtttgatgaattccagattgtcagtagttcacacgatgacacaatcctcatctgg
gacttcctaaatgatccagctacccaagctgagcccccccgctccccttctcgaacatac
acctacatctccagataa

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