Sciurus vulgaris (Eurasian red squirrel): 306665476
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Entry
306665476 CDS
T11892
Symbol
NUP153, ACX6B4_027908
Name
(RefSeq) nuclear pore complex protein Nup153 isoform 1
KO
K14296
nuclear pore complex protein Nup153
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03013
Nucleocytoplasmic transport
svul03250
Viral life cycle - HIV-1
svul05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
306665476 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
306665476 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
306665476 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svul03019
]
306665476 (NUP153)
Messenger RNA biogenesis [BR:
svul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
306665476 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
306665476
NCBI-ProteinID:
XP_079003181
LinkDB
All DBs
Position
7:complement(148924557..148988241)
Genome browser
AA seq
1471 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KNEDACSCSTDTSEVPHWPENRDDDHVIYGHEESSNINDGRITPEPAVSNTEEPSTTSTA
SSYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTL
SPSLGNSSNLKTSQLGDSPFYPGKTTYGGAAAAARQSKLRNPPYQAPVRRQMKAKQLNSQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSVVSSPLNSPLDRSGIDITDFQAKREKVDA
QYPPVQRLMTPKPVSIAANRTVYFKPSLTPSGELRKINQRIDKKDNTGYEKNMTSRQNRE
QESGFSYPNFSIPAANGLSSGVGGGGGKMRRERTRFVASKPSEEEEMEVPVLPKISLPIT
GSSLPTFNFSSPAIATSSPSPTGPSQSLTNKVQMTSPSSPGSPMFRFSSPIVKSTEADVL
PPSSIGFTFSVPVAKTEFSGSSSTSEPSISTSAQDITAVNSTSCKKRDEDCEGLFRPVKI
LKEGSVLDVLKSPGFTSPKVDPLAAQPTTTSPEVYTRPAISTFSSSGIGFGENLKGGSSW
QCDTCLLQNKVTDNKCIACQAAKLPSRETAKQTGIGTPTKSSKTTLSASGTGFGDKFKPA
IGTWDCDTCLVQNKPEAMKCVACETPKPGTGVKRVLTLSVVSESAVTMAATSSTCTVASG
SLGFGDKFRRPVGSWECPVCCVSNNAEDNKCVSCMSEKPGSSVPASGSNTVPVSLSSGGC
LGLDKFKKPEGSWDCEVCFVQNKADSSKCVACESAKPGTKTEFKGFGTSSSSLNPATTSF
KFGIPSSSGPCQTLTNTGNFKFGDQGGFKIGVSSDSGSLNPISEGFKFSKPTGDFKFGVS
SDSKLEEVKKDSKNDNFKFGLSSSSSNPASSASFQFGVSNLGQQEKKEELPKSSSTSFSF
GTGIINPTPAATETVVTSESKSSFSFGTIETKSVSVTPFTCKTTEAKKEEMPTTKGGFTF
GNMEPASLPSASMFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDE
SSSKSTFSFSMTKPSEKESDQPAKATFAFGAQTNTTADQGAAKPIFSFLNNNSSGSSTPA
TSAGGGIFGSSTSSSNPPVAAFVFGQVSNPVSSSSFGNCAESSTSQSLLFSQDSKPATTS
STATAVTPFVFGPGASSNNTATSGFSFGATTTTSAAGSSFVFGTGPSAPSASPAFGSNQT
PTFGQSQGASQPNPPSFGSISSSTALFSAGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFG
SGAAPNSSSVFQFGSSTTNFNFTNNNPSGVFTFGANPSAPAASAQPSGSGGFAFNQPPAA
FTVGSNGKNMFSSSGTSVSGRKIKTAVRRRK
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccggaggaatcggagggggcggtggcggcaagatccggacgcggcgc
tgccaccaggggccaattaagccttaccagcaggggcgaccgcagcaccagggcattctt
agcagggttacagaatctgttaagaatattgtgccagggtggctacaaagatatttcaac
aagaatgaagatgcatgtagctgctcaacagacacgagtgaggttccacactggccagaa
aatagagatgatgatcatgtgatatatggccatgaggagagctctaatattaatgatggg
agaatcacccctgagccagctgtcagtaatacagaagaaccttcaacaactagtactgct
tccagttacccagatgtattaacaaggccttctcttcatcggagtcacctgaacttctcc
atgctggaatccccagcgttgcactgtcagccgtccacgtcctcggcattcccaattggc
agttctggattttcccttgtaaaggaaataaaagattctacctctcagcatgatgatgac
aacatctcaactaccagtggtttttcttcaagagcctctgataaagatatagctgtttca
aagaacacttcattgccacctctgtggtctccagaggctgaacgttctcattcactctca
caacatactgccaccagctcaaaaaaaccagcattcaacttatctgcctttggaacactt
tccccttcacttgggaattcttcaaaccttaaaacaagtcagcttggagattctcctttt
tatcctggaaaaacaacatatggtggggcagcagctgctgcaagacagtctaagctacga
aatccaccttatcaggcaccagtgagaagacagatgaaagctaagcaacttaattcacaa
tcttatggtgtgaccagttcaacagctcggcgaatattgcagtctttagagaagatgtca
agtcctctagcggatgcgaaaagaattccatcagttgtttcttcacctctaaactctcct
cttgatagaagtgggatcgatatcacagattttcaagccaaaagagaaaaggtggacgct
cagtatccccctgttcagagacttatgactccaaagccagtttccattgcagcaaatcga
actgtttattttaaaccatctctgaccccatctggtgaattaaggaagattaatcaaaga
atagataaaaaggacaatactggatatgaaaaaaatatgacatcaagacaaaatagagaa
caagaaagtggcttttcatatccaaatttcagtattcctgcagccaatggtttatcttct
ggagtaggtggtggaggtggcaagatgagacgagagagaacacgctttgttgcttctaaa
ccttcagaggaggaggaaatggaagtaccagtattaccgaaaatctccctaccaatcacc
ggttcttcactgcctaccttcaattttagttctccagcaattgcaacttcctctccatca
cccactggtccatctcagtcattaacaaacaaggtacaaatgacatctccgagcagccct
ggcagtcccatgtttagattttcatctccgattgtaaaatctactgaggcagatgtacta
cctccatcctctattggatttacatttagtgtgcctgttgcaaaaacagaattttctggc
tctagtagtacttcagaaccaagcataagtacttcagctcaagatatcactgcggtgaac
agcacaagctgtaagaagcgagatgaagattgtgagggcctttttagacctgtaaaaatc
ctgaaagaaggaagcgttttagatgtgctgaaaagccctggtttcacatcaccaaaggta
gatccccttgctgctcagcctaccacgacaagcccagaagtttatacaagaccagcaata
agtacattttcttctagtggaatcgggtttggggaaaatttaaagggtggatcatcatgg
cagtgtgatacctgtctactccagaacaaagttacagacaacaagtgcatagcctgtcaa
gcagcaaaattaccatcaagagaaactgccaaacagactggaattgggacaccaaccaaa
agtagcaaaacaactctttctgcgtcgggtacaggctttggagacaaatttaaaccagca
ataggaacttgggattgtgacacctgtttagtgcaaaataaaccagaagcaatgaaatgt
gtagcctgtgaaacaccaaaacctggcactggtgtgaagcgagtgctcacgttgtcagtg
gtttcagaaagtgctgtgaccatggctgcaacatcttccacctgcactgtggcatccggt
tctttaggatttggagataaattcagaaggcctgtgggatcttgggagtgtccagtttgc
tgtgtttctaataatgcagaagacaacaagtgtgtgtcctgcatgtctgagaagccagga
agttcagtacctgcttcaggtagcaacactgtacctgtctctctgtcttctggaggctgc
ctaggattggacaagttcaaaaaacctgagggaagctgggactgtgaagtgtgcttcgta
cagaataaagccgactctagcaaatgtgttgcatgtgaaagtgcaaagccaggcacgaaa
actgagtttaaaggctttggcacatcttcctcatctttgaatccagcaactacatccttc
aaatttggtatcccatcatcatctgggccttgtcagaccttaacaaacactgggaatttt
aagtttggtgatcagggaggattcaaaataggtgtatcatctgactccggatctctaaac
cccatcagtgaaggctttaaattttctaaacctactggagattttaaatttggagtttca
tcagattctaaacttgaagaagttaaaaaagacagtaaaaatgataattttaagtttgga
ctttcttctagttcaagcaacccagcttcttcagcttcatttcagtttggagtatctaat
ctggggcagcaagaaaagaaggaggaactgccaaaatcttcatctacaagcttcagcttt
ggtacgggcattattaaccctacccctgctgctactgaaactgtggtgacctctgagagc
aagagcagcttcagttttggaaccatagaaaccaagagtgtctcagtgactcctttcaca
tgtaagacaacagaagctaaaaaggaagaaatgcctacgaccaagggcgggttcactttt
ggcaatatggaacctgcctctctgccttctgcctccatgtttgttttgggaaggacagaa
gagaagcaacaagagcctgtcacttctacttctctggtttttgggaagaaagctgacaat
gaagagccgaagtgtcaaccagtattttcctttgggaattcagagcaaaccaaagatgag
agttcttcaaagtcaacatttagtttcagtatgacaaaaccatctgagaaggaatctgat
caaccagcaaaggctacatttgcttttggagctcaaaccaatactacagctgatcaaggt
gcagcaaagccgatttttagtttcttgaacaacaattcctctggttcaagtaccccagcc
acttcagctggtggtggcatatttggtagttccacttcttcctccaacccgcctgtggct
gcctttgtgtttgggcaggtcagcaatcctgtgagcagctcctcctttggtaattgtgct
gaatccagtacgtcgcagtctttgctgttttctcaggacagcaaaccagcaaccacatcc
agcacagctacagcagtcaccccgttcgtctttgggccaggagccagcagtaataatact
gcgacctctggtttcagctttggagctacaaccacgactagtgctgcaggatcctccttt
gtatttggcactggaccttcagcaccatctgccagtccagcatttggttctaaccagacc
ccaacatttggacagagtcaaggtgccagccagcctaatcccccgagctttgggtcgata
tcatcttcaacagcattattttctgctgggtctcagcctgcacctcctacttttggaaca
gtgtcaagtagtagtcagcctcctgtgtttggacaacagcctagtcagtctgcatttggc
tctggagcggctcctaattccagttcagttttccaatttggcagcagcactacaaatttc
aacttcacaaacaacaacccatcaggagtgttcacatttggtgcaaatcctagtgcacct
gcagcctcagcccagccctctggctctgggggctttgccttcaaccagcctccagcagca
ttcacagtggggtcaaatgggaagaatatgttctcctcttctggaacttcagtttctggt
cgaaagataaagactgctgttagacgcaggaaataa
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integrated database retrieval system
