Sciurus vulgaris (Eurasian red squirrel): 306667611
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Entry
306667611 CDS
T11892
Symbol
SMARCB1, ACX6B4_030043
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03082
ATP-dependent chromatin remodeling
svul03250
Viral life cycle - HIV-1
svul04714
Thermogenesis
svul05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
306667611 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
306667611 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
306667611 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
306667611 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svul01009
]
306667611 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svul03021
]
306667611 (SMARCB1)
03036 Chromosome and associated proteins [BR:
svul03036
]
306667611 (SMARCB1)
Protein phosphatases and associated proteins [BR:
svul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
306667611 (SMARCB1)
Transcription machinery [BR:
svul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
306667611 (SMARCB1)
SWI/SNF complex
306667611 (SMARCB1)
Chromosome and associated proteins [BR:
svul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
306667611 (SMARCB1)
PBAF complex
306667611 (SMARCB1)
SWI/SNF complex
306667611 (SMARCB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
306667611
NCBI-ProteinID:
XP_079006479
LinkDB
All DBs
Position
8:complement(122462638..122494461)
Genome browser
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcactgagtaagaccttcgggcaaaagcccgtcaagttccagctggag
gacgacggcgaattctacatgatcggctctgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcgctctggaggcgtctagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcatgga
tataccactctggccaccagtgtgactctgttaaaagcctcagaggtagaagagatcctg
gatggcaatgatgagaagtacaaggctgtgtcaatcagcacagagcctcccacatacctc
agggaacagaaggccaagaggaacagccagtgggtacccactttgcccaatagctcccat
catctggatgctgtgccatgttccaccaccatcaataggaaccgcatgggccgggacaag
aagagaactttccccctttgctttgatgatcatgacccagctgtaattcatgagaatgca
tcccagcctgaggttctggtgcccatccggctggacatggagattgatgggcagaagctg
cgggatgcttttacttggaacatgaatgagaagctcatgacccctgagatgttttcagaa
atcctttgtgatgatttggatttgaacccactcacgttcgtaccagccattgcctctgcc
atcagacagcagatcgagtcctaccccacagacagcatcttggaggaccagtctgaccag
cgtgtcatcatcaagctgaatatccacgtgggaaacatctccttggtggaccagtttgag
tgggacatgtcggagaaggagaactcaccagagaagtttgccctgaagttgtgctcagag
ctggggttgggcggggagtttgtcaccaccatcgcgtacagcatccggggacaactgagc
tggcatcagaagacctatgccttcagtgagaaccccttacccacggtggaaattgctatc
cggaacacgggtgatgcggaccagtggtgcccactactagagactctgactgatgctgaa
atggagaagaagatccgagaccaggacaggaacacaaggcggatgaggcgtcttgccaat
actgccccagcctggtga
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integrated database retrieval system
