Sciurus vulgaris (Eurasian red squirrel): 306668301
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Entry
306668301 CDS
T11892
Symbol
TOP3B, ACX6B4_030733
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform 1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03440
Homologous recombination
svul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
306668301 (TOP3B)
03460 Fanconi anemia pathway
306668301 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svul03032
]
306668301 (TOP3B)
03400 DNA repair and recombination proteins [BR:
svul03400
]
306668301 (TOP3B)
Enzymes [BR:
svul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
306668301 (TOP3B)
DNA replication proteins [BR:
svul03032
]
Eukaryotic type
DNA Topoisomerases
306668301 (TOP3B)
DNA repair and recombination proteins [BR:
svul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
306668301 (TOP3B)
FA (Fanconi anemia) pathway
306668301 (TOP3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
306668301
NCBI-ProteinID:
XP_079007646
LinkDB
All DBs
Position
8:123092946..123118184
Genome browser
AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGSMASHKGLNGACSVHEYTGTFAGQPVRFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKAHSSEKTVFRARFSSITDTDICNAMTRLGEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNTDKDKSLLLDWDRVRVFDREIAQMFLNMTKLEKEARVEATSRKEKAKQRPLA
LNTVEMLRVASSALGMGPQHAMQTAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANH
PYWADTVKRLLAEGINRPRKGHDAGDHPPITPMRSATEAELGGDAWRLYEYITRHFIATV
SHDCKYLQSTISFRIGPELFTCSGKTVISPGFTEIMPWQNVPLEESLPTCQKGDTFAVGE
VKMLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCFENAYRVRVSADTCNTCEAALLD
VDFNKAKSPLPGDETQHTGCVFCDPIFQELVELKHAASCHPMHRGGPGRRQGRGRGRGRR
PPGKPNPRRPKDKMSALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgttcttatggttgcagagaagccatccctggcacagtccatcgccaaaatt
ctttctcgagggagtatggcctcacacaaagggctgaatggggcctgctcagtccatgag
tacacaggaacctttgctggccaaccagtccgcttcaagatgacatctgtctgtggtcat
gtgatgactctggatttcctgggaaagtacaacaagtgggacaaggtggaccctgcagag
ctgttcagtcaagctccaacagagaagaaggaagctaatcccaagctgaacatggtgaag
ttcctgcaggtggagggcagaggctgtgactacattgtgctatggctagactgtgacaag
gaaggggagaacatttgctttgaggtccttgatgctgttctgcctgtcatgaataaagcc
cacagcagcgagaagacggtgttccgggctaggttcagctccattactgacacagacatc
tgtaacgccatgacccgcctgggtgagccagaccacaatgaggcactctcagtggatgcc
cgacaagagctggacctgcgtattggctgtgctttcactaggttccagacaaaatatttc
caggggaaatatggtgatttagatagctctctcatttcctttggaccatgtcagactcct
accctgggattctgtgtggagagacatgataaaatccagtccttcaaaccagagacctac
tgggtgctgcaggccaaggttaacacagataaagacaaatctctccttttggactgggac
cgagtcagagtatttgaccgggaaattgcacagatgtttttaaacatgacaaaactggag
aaggaagctcgggtggaggccacaagcaggaaagaaaaggccaagcagaggccactggcc
ctgaacactgtggagatgctacgtgtggctagctctgctctgggcatgggaccacagcat
gccatgcaaacagctgagcggctgtacacacagggctacatcagctacccacggacagag
accacccattaccctgagaactttgacctgaagggttctctgcggcagcaggctaaccac
ccctactgggcagacacggtgaagcggttgctagcggaaggtatcaaccgcccacggaaa
ggccatgatgctggtgatcatcctcctatcacacccatgaggtctgccacagaggcagaa
ttagggggtgatgcatggcggctctatgagtacatcaccaggcacttcattgccaccgtt
agccatgactgcaagtacctccaaagcaccatctccttcaggattggtcctgagctcttc
acctgctcagggaagactgtcatctcaccaggtttcacagagatcatgccctggcagaat
gtgcccctggaagagagcctgcccacctgccaaaagggtgatacctttgctgtgggtgaa
gtgaagatgctggagaagcagacaagcccacctgactacttgactgaggctgagctcatc
acactcatggagaaacatggcattgggactgacgccagcattcctgtgcacataaacaat
atctgtcagcgcaactatgtcactgtggagagtggccgccgactcaagcccaccaacctt
ggcattgtcctggtacatggctactacaagattgatgcagagcttgtgcttcccactatt
cgaagcgctgtggagaagcagctgaacctgattgctcaaggcaaggctgactaccgccag
gtcctaggccacaccttggatgtcttcaagaggaagttccactactttgttgactccatc
gctggtatggatgagttgatggaggtgtctttttcacccctggcagccacaggcaagccc
ctttcacgctgtgggaagtgtcaccggttcatgaagtatatccaggccaagccaagccgc
ttgcactgctcccactgtgatgagacctacaccctccctcagaatggcaccatcaagctc
tacaaggagctgcggtgcccactggatgactttgagctggttctgtggtcatcaggctcc
cggggcaagagctacccactgtgtccctattgctacaaccacccacccttccgagacatg
aagaaaggcatgggctgcaatgagtgcacacaccccacctgccagcactcactgagcatg
ctgggcatcggccagtgtgtagagtgtgagagtggggtgctggtgctggaccccacctca
ggccccaagtggaaggtggcctgcaacaagtgcaacgtggtggctcactgctttgagaat
gcctaccgtgttcgggtgtctgccgacacctgcaatacctgcgaggctgccctgctggac
gtggacttcaacaaggccaagtccccactcccaggcgatgagacacagcacacaggctgt
gtcttctgtgaccccatattccaggagctggtggagctgaagcacgcagcctcttgccac
cccatgcaccgaggtgggcctgggaggaggcagggccgagggcggggccggggccggcga
cccccagggaagcccaatcccaggaggccaaaggacaagatgtcagccctggccgcctac
tttgtatga
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