Sciurus vulgaris (Eurasian red squirrel): 306668575
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Entry
306668575 CDS
T11892
Symbol
VPS50, ACX6B4_031007
Name
(RefSeq) syndetin isoform 1
KO
K23288
syndetin
Organism
svul Sciurus vulgaris (Eurasian red squirrel)
Brite
KEGG Orthology (KO) [BR:
svul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svul04131
]
306668575 (VPS50)
Membrane trafficking [BR:
svul04131
]
Protein recycling
Others
EARP complex
306668575 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
306668575
NCBI-ProteinID:
XP_079008213
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All DBs
Position
8:complement(49979671..50099864)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDFGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAVVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEETFSASEG
SNVIATEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKTETLFEQYCSGGNPFEIQASHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNTLWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHRQEYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccgacagggtctgaaaagccctccagagagcctc
agtgattttggtgccattgagagtctccgggtccctggaaaggaggaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagagctaattaatagtattgaacaagta
tatttttctgcggactcttttgatattgtcaaatatgagctggagaagctcccacctgtt
ctcaatttgcaagaattagaggagtatagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattgcagacaggccttcagttagctgtggttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggtttcactcaagctagtttgggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtacgcttgagtgaaatgctggaggaggaagactatccaggagctatt
caattgtgcctggaatgtcagaaagctgccagtacttttaaacattatagttgtataagt
gagctgaattcaaagctgcaagatactttagaacaaattgaggaacaattggatgtagct
ctttcgaaaatctgcaagaattttgacattaatcattataccaaggttcaacaggcttat
cgacttcttggaaaaacacagactgcaatggatcagcttcatatgcacttcacccaggcc
attcacaatactgtgtttcaagtcgtccttggttatgtggaactatgtgcaggaaacacc
gatacaaaattccaaaagctgcaatataaagatctctgtacgcatgttacaccagacagc
tatattccatgccttgcagatctctgtaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacagtgaggagactttttccgcttctgaagga
agtaatgtaatagctactgaagaaaccaattttgatcgtggctatgtgaaaaagaagtta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctatttgctt
ggaactgatttgtctatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaactatttcaagaactaccatagaacacgactagatgaactg
agaatgttcttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatt
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagt
aagcagccagtctcaacttcttcaaaaacagagaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggccagccacaaagatgaagaaacagaagatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaggagtatgacagtgac
agtgatgttcccgaggaactcaagcgagattatgtggatgagcagacaggagacgctcct
gtgaaaagtgtttctcgagaaaccctaaaaagtcggaagaaatcagattacagtctaaat
aaagtgaacgcacccatcttaacaaatacgacattgaatgtaataaggcttgttgggaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtct
cagctatttgattattacttgtatgccatatatactttttttggccggaatgattcattg
gaatcaacaggactcggtcttagtagtagtagactaagaacaactctcaacagaatacaa
gaaagccttattgatttggaagtttcagctgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtacccagcccacacctcagtcacctagtggttttgacatctggg
gattcattgtatgggttggcagaaagagtggtagccacagaatccctggtatttctggct
gaacagtttgaattccttcagccacatctggatgctgtgatgccagcagtcaaaaagccc
tttctgcagcagttttattctcagacagtctcaactgctagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaatcatgtcacagcataacatatacgtagatgcattgtta
aaggaattcgagcagtttaacaggaggttaaatgaagtttctaagagagttcggataccg
ttgcctgtgtctaatacactttgggaacattgtatacgattggccaataggactattgtg
gaaggatatgccaacgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtggaaacttatatcaaagcctactacctaactgagaatgacatggaacgctgg
atcaaagagcacaggcaggaatattcaacaaagcaactgaccaatctggtgaatgtttgc
ctgggatcccatatcaataagaaagcaagacagaaacttctagcagctatagatgatata
gaccgacctaaaagataa
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