Staphylococcus warneri: A284_04065
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Entry
A284_04065 CDS
T02449
Name
(GenBank) DEAD-box ATP dependent DNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
swa
Staphylococcus warneri
Pathway
swa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
swa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A284_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
swa03019
]
A284_04065
03009 Ribosome biogenesis [BR:
swa03009
]
A284_04065
Enzymes [BR:
swa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A284_04065
Messenger RNA biogenesis [BR:
swa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A284_04065
Ribosome biogenesis [BR:
swa03009
]
Prokaryotic type
rRNA helicases
A284_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
Cas3-like_C_2
Flavi_DEAD
AAA_19
INTS5_N
Motif
Other DBs
NCBI-ProteinID:
AGC90132
LinkDB
All DBs
Position
844143..845672
Genome browser
AA seq
509 aa
AA seq
DB search
MQNFKELGISDKTVQTLESMGFKEPTPIQKDSIPYALEGHDILGQAQTGTGKTGAFGIPL
IEKVVGEQGVQSLILAPTRELAMQVAEQLKVFSKGQNVQVVTVFGGMPIERQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTML
FSATMPKAIQTLVQQFMKTPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDANN
RRMTALRPPHRKEVLKAREDDIKEKVQNWMSKDNEPRLQRISTELLEEYNDVELVASLLQ
ELVEANDEVEVQLTFEKPLSRKGRNSKGNNNSRRGNNKRGGGKFDNKNRRSSKGFASKKN
GNKKFDRKDKSSQGSNKTMKGRTFADHQK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactagggatttcggataaaacggttcaaacacttgaatctatg
gggtttaaagagccaactcctatccaaaaagatagtatcccttatgcgttagaaggacat
gacatccttggacaagctcaaacaggtactggtaaaacgggtgcgtttggtataccttta
attgaaaaggttgttggagaacaaggtgttcaatcgttaattctagcgcctactagagaa
ttagctatgcaagttgcagagcaattaaaagtatttagtaaaggtcaaaacgtacaagtt
gttacggtatttggtggtatgcctatagagcgccaaattaaagccttgaaaaaaggacca
caaattgttgtaggtacaccaggacgtgtaattgaccatttaaatagacgcacattaaaa
actaatgacattcatacacttatcttagacgaagcggatgaaatgatgaacatgggattc
atcgatgatatgagatttatcatggataaaattccagctgaacaacgtcaaacaatgctt
ttctcagctacaatgccaaaagctattcaaacattagtacaacaattcatgaaaacacca
aaaattattaaaacaatgaataatgaaatgtccgatccacaaatcgacgaatactataca
attgtgaaagaattagaaaaattcgacactttcactaatttcttagacgtacatcaacca
gaactagcaattgtgtttggtcgaacaaaacgtcgtgtagacgaattaacaagcgcgtta
ctttctaaaggatataaagctgaagggttacatggtgacatcacgcaagctaaacgttta
gaagtattgaaaaaattcaaaaacgatcaaattgacattcttgtagcaacagacgtagca
gcgcgtggtttagatatctcaggcgtaagtcatgtttataactttgatattcctcaagat
actgaaagttatacgcacagaattggacgtactggtcgtgctggtaaagaaggtatcgct
gttacttttgtaaatccaatcgaaatggattatattcgtcaaatcgaagatgctaataat
agaagaatgactgctttaagaccaccacatcgtaaagaagtgttgaaagcacgtgaagac
gatattaaagaaaaagtacaaaactggatgtctaaagacaatgaacctcgtttacaaaga
atttcaactgaattacttgaagaatataacgatgttgagttagttgcatcattattacaa
gagttagttgaagctaatgatgaagttgaagttcaattaacttttgaaaaaccactttca
cgtaaaggtcgcaattcaaaaggtaacaacaactctagaagaggcaataataaacgcggt
ggcggtaagtttgataacaaaaacagacgatcatctaaaggttttgcttctaagaaaaat
ggtaacaagaaatttgaccgtaaagataaatcatctcaaggttcaaacaaaactatgaaa
ggtcgcacatttgctgaccatcaaaaataa
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