Staphylococcus warneri: A284_05280
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Entry
A284_05280 CDS
T02449
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
swa
Staphylococcus warneri
Pathway
swa03030
DNA replication
swa03430
Mismatch repair
swa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A284_05280
03430 Mismatch repair
A284_05280
03440 Homologous recombination
A284_05280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swa03032
]
A284_05280
03400 DNA repair and recombination proteins [BR:
swa03400
]
A284_05280
Enzymes [BR:
swa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A284_05280
DNA replication proteins [BR:
swa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A284_05280
DNA repair and recombination proteins [BR:
swa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A284_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AGC90373
LinkDB
All DBs
Position
1117776..1120970
Genome browser
AA seq
1064 aa
AA seq
DB search
MVAYLNIHTSYDLLNSSLRISDVVKKAKNEGIEHLAITDTNVLYGYPKFYDACLEAGIHP
VFGMTVYLTDGLYQLETVLLAQNNDGLKDLYQLSSAIKMKEKEDIPIEWLKRYANHLVII
FKSAEEHHLQFIDAFNDKEHVYLNQDCIAINHRSFVWLNTMRYLNNEDADTISALQAIKE
NSKLDLVAEQEDYHEHVFNKNELRNLECSDELIVNTDKIAQMCTAELNYHQSLLPQFQTP
NGETSKIYLWQKLEDQLNHLNLKQPEYWKRLKHEYDIITNMGFEDYFLIVSDLIHYAKTH
DVMVGPGRGSSAGSLVSYLLGITTIDPIRFNLLFERFLNPERVTMPDIDIDFEDTRREKV
IQYVQEKYGQLHVSGIVTFGHLLARAVARDVGRIMGFDEITLNEISKLIPHKLGITLEEA
YQNDEFKQFVHRNYRHERWFEICKKLEGLPRHTSTHAAGIIINDHALYEYAPLTLGDTGL
LTQWTMTEAERIGLLKIDFLGLRNLSIIHQIINQVKKDLNINIEIERIPFDDPKVFELLS
QGDTTGIFQLESDGVRRVLKKLKPEHFEDIVAVTSLYRPGPMEEIPTYITRRHDPSKVEY
LHKDLAPILKNTYGVIIYQEQIMQIASQFANFSYGEADILRRAMSKKNRAVLESERQHFV
DGAKQNGYDEYMSKQIFDLILKFADYGFPRAHAVSYSKIAYIMSYLKVHYPNYFYANILS
NVIGSEKKTAAMIDEAKHQSITILPPNINESHWFYKATSDGIYLSLGAIKGAGYQSVKLI
VDERYQNGDFKDFFDFARRLPKRVKTRKLLESLILVGAFDIFGKNRATLLHSIDQVIDQV
TDIEQDDMLFDFFTPKQSYEEKEELPDQLISEYEKEYLGFYISKHPVEKEFNKKQYLTIY
KLSNAKNHQPILVQFDQIKRIRTKNGQNMAFVTLNDGIHLLDGVIFPNQFKKYELDISEE
QIYVVQGKFDKRNGKTQLIINDIYTEEAFESLKLNQTKQIIVRKVDQVEGFYQYLDQENI
DQSIEVLSFNDQTNEMSRLGYIKKNSAFLTDLVKLFKPSDIRFV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggttgcatatttaaatattcatacgtcatacgatttattaaattctagcttaagaata
tcggatgtcgttaaaaaagctaagaacgaaggcattgaacaccttgcaatcacagatact
aatgttttgtatggctatcctaaattttatgatgcgtgtttagaagcggggatacacccc
gtttttggtatgaccgtctatttaactgatgggttgtatcaattggagactgtactattg
gcacaaaataatgatggcttaaaagatttatatcaattatcatcagcgattaaaatgaaa
gaaaaagaagatattcctattgagtggttgaaacgttatgcaaatcatctcgtcatcata
tttaaaagtgccgaagaacatcatttacaatttattgatgcttttaatgataaagaacat
gtctatcttaaccaagattgtattgcgattaatcatagatcgtttgtttggttgaatacc
atgcgttatttaaataatgaagatgccgatacgatttcagcacttcaagccattaaagaa
aatagtaaattagatttagtagctgaacaagaagattaccatgaacatgtatttaataaa
aatgaacttcgaaatttggaatgtagtgacgaattaattgttaatactgacaaaattgca
caaatgtgtaccgcagagttaaattatcatcaatctttattacctcagttccaaacgcct
aatggtgaaacttctaaaatatacttatggcagaaacttgaagatcagttaaatcattta
aatttgaaacaaccagaatattggaaaagattaaaacatgagtatgacattatcacaaat
atgggctttgaagattatttcttaatcgtaagtgatttaattcattatgctaaaacacat
gatgtgatggttggaccagggcgtggatcttcagcaggctcattggtaagttatctactt
ggtattacaacaatagatcctataagatttaatttactttttgaacgttttttaaatccc
gaacgagtaacgatgcctgatattgatattgattttgaagatacacgacgtgaaaaagtc
attcaatatgttcaagaaaaatatggtcaattacatgtttccggaattgtaacatttggt
catttacttgcaagagctgttgcacgagacgtgggacgtattatggggtttgatgaaata
acgctaaatgaaatttctaaattaatcccacataaattaggaatcactttagaagaagct
tatcaaaatgatgaattcaaacaatttgttcatcgtaattatcgtcatgaacgatggttt
gaaatatgtaaaaagttagaaggtctaccaagacatacgtcaactcacgcagcagggatt
attattaatgatcatgctttgtatgagtatgcacctttgaccttaggagatacaggatta
ctaacacaatggacaatgactgaagctgaacgcattggtttattaaaaattgacttttta
ggtttaagaaatctatccatcattcatcaaattatcaatcaagttaaaaaggatttgaat
atcaacattgaaatagaacgtataccttttgacgatccaaaagtttttgaattattgtct
caaggagatacgactggtattttccaattagagtcagatggcgtacgccgagtattgaaa
aagttaaaacctgaacatttcgaagatatcgttgctgttacttcgttatatagacctgga
cctatggaagaaattccaacttatattacacgaagacatgacccatcaaaagttgaatat
ttacacaaagacttagcacctattttgaaaaatacctatggcgttattatttatcaagag
caaattatgcaaatcgctagtcaatttgccaactttagttatggtgaagcagatatttta
agacgtgcaatgagtaaaaagaatagagccgtacttgaaagtgaaagacagcactttgtt
gatggtgctaaacaaaatggctacgacgaatatatgagtaaacaaatttttgatttaata
ttaaaatttgctgattatggttttcctagagcacatgcagttagttattcgaaaatcgct
tatataatgagttatttaaaagtgcattatcctaattatttctatgccaatatattaagt
aatgtaattggcagtgagaaaaaaacagctgctatgattgatgaggctaaacatcagagt
attacgatactaccacccaatataaacgaaagtcattggttctataaagcaacaagcgat
ggtatctatttatcactaggtgctattaaaggtgcgggatatcaaagtgtgaaactgatc
gtagacgaaagatatcaaaatggtgactttaaagatttctttgattttgcaagacgatta
cctaaaagagtaaaaacccgaaaattattagaatctttaattttagtgggtgcctttgat
atattcggtaaaaatcgagctactttattacattcaattgaccaagtcattgatcaagta
accgatatagaacaagatgatatgttattcgatttcttcacaccaaaacaatcttatgaa
gaaaaagaagaattaccagatcaattaataagtgaatatgaaaaagaatacttaggattt
tatatctctaagcaccctgtagagaaagaatttaacaagaaacaatatttaacgatatac
aaattaagtaatgccaaaaaccatcagcctattttagtgcagtttgatcaaattaaacga
attagaacaaagaatggtcaaaatatggcattcgtaaccttgaatgatggtattcattta
ctggatggcgtcatatttccaaatcaatttaaaaaatatgaacttgatatatctgaggaa
caaatttatgtcgttcaaggaaaattcgataaacgaaatggaaaaacgcagttgattatc
aatgatatttatacagaggaagcatttgaatcattgaaattgaaccaaaccaaacaaatt
attgttagaaaagttgatcaagttgaagggttctatcaatatttagatcaggaaaatata
gatcaatccattgaggttttatcattcaatgatcaaacaaatgaaatgtcaagattaggt
tatattaagaaaaattcagcttttttaactgatttagttaagttatttaaaccaagtgat
atccgttttgtataa
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