Staphylococcus warneri: A284_09520
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Entry
A284_09520 CDS
T02449
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
swa
Staphylococcus warneri
Pathway
swa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
swa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A284_09520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swa03400
]
A284_09520
DNA repair and recombination proteins [BR:
swa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A284_09520
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A284_09520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_25
AAA
AAA_22
HerA_C
UFL1
UB2H
HEM4
TrwB_AAD_bind
AAA_7
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AGC91219
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All DBs
Position
complement(2000996..2002981)
Genome browser
AA seq
661 aa
AA seq
DB search
MVEHYPFKLNSEFDPQGDQPEAIKKIVKGVKEGKRHQTLLGATGTGKTFTMSNVIQQVGK
PTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDE
IDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMERSELLRKLVD
VQYTRNDIDFQRGTFRVRGDVVEIFPASREEMCIRVEFFGDEVDRIREVNYLTGEVIRER
EHFAIFPASHFVTREEKMKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMR
EMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLIMIDESHVTLPQVRGMYNGDRARK
QVLVDHGFRLPSALDNRPLKFEEFEEKTNQLVYVSATPGPYEIEHTDEMVEQIIRPTGLL
DPKIDVRPTENQIDDLLSEIQDRIDKNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSE
IKTLERIEIIRDLRMGTYDAIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTI
GRAARNDRGEVIMYADKITDSMRYAIDETQRRRDIQMAHNEKHGITPQTINKKIHDVISA
TVESDDTNENKQIEVPKKMTKKERQKTIENIEKEMKKAAKDLDFEKATELRDMLFELKSE
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacattatccattcaaattaaattcagagttcgatcctcaaggtgatcaacct
gaagcaataaagaaaattgttaaaggtgttaaagaaggtaagagacaccaaacactactt
ggtgcaacaggaacaggtaaaacatttacgatgagtaatgtaatacaacaagtaggtaaa
ccaaccttgattattgcacataacaaaacattggctggacaattatatagtgaatttaaa
gaatttttcccggaaaatagagtggaatatttcgtgagttactacgattactatcagcca
gaagcttacgtaccatcgacagatacatttattgaaaaagatgcgtctattaatgatgaa
attgaccaattaagacactcagcaacgagcgcattgtttgagagagatgatgttattatc
atagcaagtgtgagttgtatttatggtttgggtaatccagaagaatataaagatttggtt
gtcagtgtgcgtgtgggcatggaaatggaacgtagcgaattactaagaaaactagttgat
gtgcaatatactagaaatgatatagacttccaacgtggtacatttagagtacgaggcgat
gtggttgaaatattccctgcttcaagagaagaaatgtgtattcgagtagaatttttcggt
gatgaagtcgatcgtattagagaagtgaattatttaacaggcgaagttataagagaacgt
gaacattttgcaattttcccagcatcccacttcgttacgcgtgaagaaaagatgaaagtt
gcaatcgagagaattgaaaaagaattagaagaacgtttaaaagagttaagagatgaaaat
aaacttttagaagcacagagattagaacaaagaactaattatgacttagaaatgatgcgt
gagatggggttctgctcaggtattgaaaactactctgtacatttaacgttaagaccacta
ggttctaccccatatacattgcttgattactttggcgatgattggttaatcatgattgat
gaatcacacgtgacactacctcaagtaagggggatgtataacggtgatagagcacgtaag
caagttttagttgatcatggattcagattgccaagtgctttagacaacagacctttaaaa
tttgaagagtttgaagaaaaaacaaatcaattagtctatgtatctgccacaccaggacct
tatgaaatagaacataccgatgaaatggtagagcagattattcgacctactggattgtta
gatccaaaaattgatgtgcgtccaacagaaaatcaaattgatgacttgttgagtgaaatt
caagatagaattgataaaaatgaaagagtactggttactactttaactaaaaaaatgagt
gaagatttaacaacatatatgaaagaagcaggaattaaagttaattatcttcattcggaa
atcaaaactctcgagagaatagaaatcataagagacttacgtatgggtacctatgatgca
attgttggaattaacttgttaagagaggggatagatattcccgaagtttcattggttgtt
atcttagatgcagataaagaaggatttttacgttccaatcgttctttaattcaaacaatt
ggacgtgcagcacgaaatgatcgtggtgaagttattatgtacgctgataagattacagat
tcaatgagatatgccattgatgaaacgcagagacgtcgtgatatacaaatggctcataat
gaaaaacacggtattacacctcaaacaattaataagaaaattcatgatgtcatcagtgca
accgtcgaaagtgatgatacaaatgaaaataaacaaatagaagttcctaagaaaatgacg
aagaaagaacgtcaaaaaacgatagaaaacatagaaaaagaaatgaaaaaagcagctaaa
gatttagactttgagaaagcaacagagttaagagatatgttattcgaattaaaatcagaa
gggtga
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