Staphylococcus warneri: A284_10630
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Entry
A284_10630 CDS
T02449
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
swa
Staphylococcus warneri
Pathway
swa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
swa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A284_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swa03021
]
A284_10630
03400 DNA repair and recombination proteins [BR:
swa03400
]
A284_10630
Enzymes [BR:
swa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A284_10630
Transcription machinery [BR:
swa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A284_10630
DNA repair and recombination proteins [BR:
swa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A284_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AGC91439
LinkDB
All DBs
Position
complement(2231066..2234689)
Genome browser
AA seq
1207 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAKMGAEGIRDLLS
EIDLDEELKILRDELESATGQRLTRAIKRLEVVESFRNSGNDPAWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIVEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERTDAVNTGTIYNDTNEVLKAYANGYVHLHTRIGVH
ASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQTNLEGTTPDKYFVDPTE
LGEGGLKEFFETKELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGI
TVGVSDIVVLPDKKDILDEHEKLVERVTKQFNRGLITEEERYNAVVEIWTDAKDQIQGEL
MQSLEKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETIRHPETDEVIIRPDELITAEIAKKITDAGIEQMYIRSAFTCNTRH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVVKGENETRSYLASGTSRLKVEVGQ
SVERGEVLTEGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHNFTDANRDAFKERKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVQYDKNVAPVASSE
EEVEVTE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattatatgaaaataggattagcttcacctgaaaagatt
cgttcatggtcttatggtgaagttaagaagcctgaaacaattaactatcgtacgttaaaa
cctgaaaaagacggtcttttctgtgaaagaatatttggaccaactaaagattgggaatgt
agttgcggtaaatacaaacgtgtacgctataaaggtatggtctgtgatagatgtggtgtt
gaagtaacgaagtctaaagtacgtcgtgaaagaatgggacacatcgaattagcagcacca
gtatcacacatttggtacttcaaaggtattccaagccgtatgggccttttattagatatg
tctccaagagcattagaagaagttatttattttgcttcttatgttgttgttgatccaggt
ccaacaggtttagaaaagaaaactttattatctgaagcagaattcagagattattatgat
aaatatccaggtcaatttgtagctaaaatgggtgctgaaggtatcagagacttgttatct
gaaattgacttagatgaagaattaaaaatcttacgtgatgaattagaatctgcaacagga
caaagacttactcgtgctattaaacgtttagaagttgttgaatcattccgtaactctggt
aatgatccagcatggatgattttagatgtacttcctatcattccacctgaaatccgtcca
atggttcaattagacggtggacgttttgctacaagtgacttaaacgatttatatagacgt
gttattaaccgtaataaccgtttgaaacgtttattagatcttggtgcacctggaatcatt
gttcaaaacgaaaaacgtatgttacaagaagctgttgatgctttaatcgataatggtcgt
cgtggccgtcctgtaactggaccaggtaaccgtccattaaaatcattgtcacatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgactattcaggt
cgttccgttatcgcagtaggtccaagtctgaaaatgtatcaatgtggattacctaaagaa
atggcgctagaattatttaaacctttcgttatgaaagagttagttcaacgtgaaattgca
acaaatatcaaaaatgctaaaagtaaaattgaacgcatggatgacgaagtttgggacgtt
ttagaagaagttatcgtagaacacccagtactacttaaccgtgcgcctacgcttcacaga
ttaggtatccaagcattcgaaccaacattggtagaaggtcgtgcaatccgtctacaccca
cttgttactacagcatataacgctgactttgatggtgaccaaatggcggttcacgttcca
ttatctaaagaagcgcaagctgaagcacgtatgttaatgttagctgctcaaaatatctta
aaccctaaagatggtaaaccagttgttacaccatctcaggatatggtattaggtaactac
tacttaacacttgaacgtacagacgcagttaatactggtactatctataatgatacaaac
gaagtattaaaagcttatgcaaatggatatgttcacttacacactagaattggtgttcat
gcaagttcattcaataatccgacattcactgaggagcaaaataagaaaatcttagctaca
tcagtaggtaaaattatctttaatgaaatcatacctgattcatttgcttatattaacgag
ccaactcaaactaaccttgagggaacaacacctgataaatactttgttgacccaacagag
ttaggtgaaggcggattaaaagaattctttgaaactaaagaattaattgaaccattcaat
aaaaaattcttaggtaatatcatcgctgaagtattcaacagattcagtattactgataca
tctatgatgcttgaccgtatgaaagacttaggattcaagttctcatctaaagcgggtatt
actgttggtgtatctgatatcgtggtattaccagataaaaaagatatcctagatgaacat
gaaaaattagttgaacgtgtgactaaacaattcaatcgtggtttaatcactgaagaagaa
agatacaatgctgtcgttgaaatttggacagatgctaaagatcaaattcaaggtgaatta
atgcaatcacttgaaaaaacaaacccaatcttcatgatgagtgactctggtgcccgtggt
aacgcatctaactttactcagttagctggtatgcgtggattaatggctgcaccatcagga
aaaatcattgaattaccaatcacttcatcattccgtgaaggtttaacagtgttagagtac
ttcatctctactcatggtgcgcgtaaaggtcttgccgatacagcacttaaaacagctgac
tcaggttaccttactcgtcgtcttgttgacgttgcgcaagatgttattgtacgtgaagaa
gattgtggtactgaccgtggcttacttgtttctgacatcaaagaaggtacagaaatgatt
gaaccattcattgaacgtatcgaaggacgttattcaaaagaaacaattcgtcaccctgaa
acagatgaagttattattcgcccagacgaattaattactgcggaaatcgctaagaaaatt
actgatgctggtatcgaacaaatgtatatccgctcagcattcacttgtaatacacgtcat
ggtgtatgtgaaaaatgttatggtaaaaaccttgcaacaggtgaaaaagttgaagttggt
gaagcagttggtacaatcgctgcccaatcaatcggtgaaccaggtacacagcttacaatg
cgtaccttccatacaggtggggtagccggaagcgatatcactcaaggtcttccacgtatc
caagagatctttgaagcccgtaaccctaaaggtcaagcggtaatcactgaaatcgaaggt
gtagtagaagatattaaattagcgaaagaccgtcaacaagaaattgttgttaaaggtgaa
aatgaaactagatcttatctagcttcaggtacttctagacttaaagtggaagtaggacaa
tcagttgaacgtggtgaagtattaactgaaggttcaatcgaaccgaaaaactacttatca
gttgctggtttaaatgctacagaaagctacttattaaaagaagtacaaaaagtttaccgt
atgcaaggtgttgaaattgatgataaacacgttgaggttatggttagacaaatgttacgt
aaagtacgtatcatcgaagcaggagatactaagttattacctggttcattagttgatatt
cacaactttactgacgctaacagagatgcatttaaagaacgtaaacgccctgcaactgct
aagccagtattgcttggtattacaaaagcttctcttgaaacagaaagcttcttatctgca
gcttcattccaagaaacaactcgtgttcttactgatgcagctattaaaggtaaacgcgat
gacttacttggtcttaaagaaaatgttattattggtaaacttatcccagctggtacaggt
atgagacgttatagtgacgttcaatacgataaaaatgtagcgccagttgctagttctgaa
gaagaagtagaagttactgaataa
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