Shewanella woodyi: Swoo_0012
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Entry
Swoo_0012 CDS
T00676
Name
(GenBank) glycyl-tRNA synthetase, beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
swd
Shewanella woodyi
Pathway
swd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Swoo_0012
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swd01007
]
Swoo_0012
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_0012
Enzymes [BR:
swd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Swoo_0012
Amino acid related enzymes [BR:
swd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Swoo_0012
Transfer RNA biogenesis [BR:
swd03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Swoo_0012
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ACA84313
UniProt:
B1KCY4
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All DBs
Position
complement(15573..17642)
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AA seq
689 aa
AA seq
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MNYENLLIEVGTEELPPKALRKLAESFVSNFTDELEKAELSFESAQWHAAPRRLAFTVNQ
LVLAQADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGISVEQAERLKTDKGEWLLHQA
KVVGVETKSLINDMAQRALDKLPIPKPMRWGTSKTQFIRPVHTVTMLLGSELVEGELLGV
KSARVIRGHRFMGKKSFELDHADNYLSALKEQGMVLADYEARKAIIKTDAEAAAAKIGGV
ADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFDKAGQLLPH
FIFVTNIESKDPQVIISGNEKVVRPRLADAEFFFETDKKQTLESRLASLETVVFQKQLGT
IKQRVERISQLAGYIAASIDADSDEASRAGLLSKSDLMTNMVMEFTDLQGTMGMHYARLN
GETEAVAVALAEQYKPKFSGDTVPTAPISVCVALAEKLDTLVGIFGIGQAPKGAADPFAL
RRAAIGVLRICLENNLPLDLVDLIAKAQELHGDNLTNDKAAEQVLEFFMGRFRAWYQDQG
VSVDVILAVLARRPTAPADFDSRIKAVAHFRSLEQASALAAANKRVSNILAKVEGELATD
ISSELLVENAEKALAEKLNELQPQLAPLFAAANYQQALSLLADLRESVDTFFEDVMVMAD
DEALKNNRLALLSSLREQFLHAADISLLQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgaaaacttactcattgaagttggtaccgaagagctgcctccaaaagccctg
cgcaaactggcagaatcttttgttagcaactttaccgatgagcttgaaaaagcagaacta
agcttcgaatcggcccagtggcacgcagcccctcgccgcctagcttttactgtaaaccaa
ttagttctagcgcaagctgacaaggtcgttgagaagcgtgggcctgcgattgcccaagca
tttgatgccgatggcaacccaactaaagccgccatgggctgggctcgtggtaacggtatt
agcgttgaacaagctgagcgcctaaaaacagataaaggtgaatggctacttcatcaagct
aaagttgttggtgtagaaaccaaaagccttatcaatgacatggcacaacgcgccctcgat
aaattgccaattcctaagcctatgcgttggggaacaagcaagactcaatttatccgtcct
gtacacacagtcactatgttactaggtagtgagctcgttgaaggtgagctccttggcgtt
aaatcggctcgtgttattcgtggtcaccgattcatgggtaaaaagagttttgagttagat
catgctgataactacctgtctgcactcaaagagcaaggcatggttcttgccgattatgaa
gcgcgtaaagcgatcataaaaacagatgcagaggctgcagccgctaagattggtggtgtt
gcagatcttgaagatgatctacttgaggaggttacctccctagttgagtggccggttgtg
ctaacggcaaacttcgaagagaagttcctcgatgtaccagcagaagccctggtttacacc
atgaaaggcgatcagaagtacttcccagtcttcgataaagctggccaattactacctcac
ttcatcttcgtgactaatatcgaatcgaaagatcctcaagtgatcatatctggtaatgag
aaagtggttcgtccacgtcttgccgatgcagagttcttcttcgaaaccgacaagaaacaa
actcttgagtctcgccttgctagcctagaaacggtagttttccaaaaacaacttggcaca
atcaagcagcgtgttgagcgtatctcacaacttgcgggctatattgcggcctcaatagat
gcagatagcgatgaagcctcacgtgcaggtctactctctaagtcagatctgatgacgaac
atggtaatggagttcaccgatcttcaaggcactatgggcatgcactatgcgcgccttaac
ggtgaaactgaagccgtcgctgttgcccttgctgagcagtataagcctaagttctctggc
gatactgtaccaacagcgcctatctcagtctgtgttgcactggctgaaaagctagatacc
ttagtcggtattttcggtatcggacaagcaccaaaaggtgcagcagatccatttgcacta
cgccgtgcagcaattggtgtattgcgtatctgtttagagaataatctgccactagatctt
gttgatttaatagctaaagcacaagagctacacggtgataatctcacgaatgataaagcc
gcagagcaggtacttgagttctttatgggacgtttccgcgcttggtaccaagatcaaggt
gttagcgtagatgtgattttagcagtactagctcgccgtcctacagcccctgctgatttc
gatagccgtattaaagccgttgctcacttcagaagccttgaacaggcgtctgcacttgca
gcagcgaataagcgtgtatcaaatattctggcaaaagttgaaggtgaactagccactgat
atcagcagtgagctattggtggaaaacgctgaaaaggcactagctgaaaagctaaatgag
cttcaacctcaactagcacctctgtttgctgcagctaactaccagcaagcgctatctttg
ctagccgatctacgtgaaagcgtcgataccttcttcgaagatgtgatggtgatggcagat
gatgaagccctaaagaacaatcgcttagccttgttatcaagcctgcgcgaacagttcctt
cacgctgcagatatctcactgcttcagtaa
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