Shewanella woodyi: Swoo_0036
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Entry
Swoo_0036 CDS
T00676
Name
(GenBank) sun protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_0036
Enzymes [BR:
swd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Swoo_0036
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Swoo_0036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_37
Cons_hypoth95
FtsJ
Methyltransf_5
Methyltransf_24
MTS
Methyltransf_23
DUF8822
Methyltransf_15
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ACA84337
UniProt:
B1KCW2
LinkDB
All DBs
Position
complement(40360..41637)
Genome browser
AA seq
425 aa
AA seq
DB search
MNLRALAAKVVFQVLEKGISLSVALPEQQKHCESGKDKALLAELSYGVMRQLPQLDKLIS
DCMAKPLKGKQRILHQLLLVGCYQLYFTRIPSHAAISETAEACRQLKFDGLVKVINAVLR
NIQRQEKPLPTDNDTLTYNTPAWIIKSLKQAYPDSWQTVIENSHQRPPMWLRNNVRSQTR
DEYLALLAEAEISASAGQSSDAILLESPKDVMQLPGFEQGAASVQDGAAQWAATLLAPAD
GELILDACAAPGGKTCHILERADTELVAVDFDANRLERVQQNLDRLSLNAKLVHGDAADI
DSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKQADIEELAQLQSKILDHCWKWLKPG
GTLLYATCSILPQENAQQISAFLERTHDATLIAISQQPNPDDIGWQITPGTENMDGFYYA
RLVKG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcgtgcacttgcggccaaggtcgtttttcaggtattggagaaagggatctcc
ctctctgttgccctgcctgaacagcagaaacattgcgaaagcggtaaagataaagcccta
ttagcagagctaagttacggggtgatgcgtcaactgccacaactcgataaactgatcagc
gattgcatggctaaaccacttaaagggaagcagaggattttgcaccaactgcttttggtc
ggctgctatcaactctactttacccgtatcccaagccatgcggcgatctcagaaactgcg
gaagcttgtcgccagctaaagttcgatggcctagtaaaagtgatcaacgcagtgctgcgt
aatattcagcgtcaagagaagccactgccgactgacaacgatacgctgacttacaatact
ccagcttggataataaaaagcctcaaacaggcctacccagacagttggcaaacagtcatt
gaaaacagtcatcaacgtccaccaatgtggttacgcaacaatgttcgctctcaaactcgc
gatgaatatctagcactgctagcagaggctgagatatcagcttcagcgggacaaagtagc
gatgctatcttacttgagagccctaaagacgtgatgcaattgccaggttttgaacaaggt
gcggcctcagttcaggacggcgcagcgcaatgggctgccaccctattggcccctgccgat
ggcgagttaattctcgatgcttgtgccgctcctggcggtaaaacctgccacatacttgag
cgcgctgacacagagttagtggcggtggacttcgatgctaaccgactcgagcgggtacag
cagaatttggaccgcctttcactaaacgctaagctagttcatggcgatgcggctgatatc
gattcctggtggcaaggtgataagtttgaccgaattttgctcgatgccccttgctcagca
acaggtgtcattcgtcgtcatccagatatcaagtggttaagaaaacaggctgatattgaa
gagttagcccagcttcaaagcaagatattggatcattgctggaagtggcttaaacctggt
ggcacactgctatacgcaacctgctcaattcttccacaagagaatgcacagcagattagt
gctttccttgaaagaacgcatgatgctacgctcattgctatctcgcagcagccaaatcct
gacgacataggctggcagatcactccgggcacggagaatatggacggattctattacgca
cgcctagtaaagggataa
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