Shewanella woodyi: Swoo_0053
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Entry
Swoo_0053 CDS
T00676
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
swd
Shewanella woodyi
Pathway
swd00860
Porphyrin metabolism
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01240
Biosynthesis of cofactors
Module
swd_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Swoo_0053
Enzymes [BR:
swd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Swoo_0053
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GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ACA84354
UniProt:
B1KD07
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Position
complement(64613..65953)
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AA seq
446 aa
AA seq
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MIEKYNYSGPRYTSYPTALEFDDSFTEEKLLTSIANSKSDKLSLYLHIPFCAKLCYYCGC
NKVITRHQHKADQYIEYLAAEIVKRAPLFKNYLVTQIHWGGGTPTFLSPDQILKLSSLIK
EHFNVADKGEYSIEVDPREIELSMLDTLKEAGFNRISIGVQDFNKKVQIAVNREQDEQFI
FDLMARAKELGFVSTNIDLIYGLPHQTPETFAETMQRVLDLDPDRLSVFNYAHLPARFAA
QRKIKDEDLASPQQKLDMLHQTIETLTGAGYQYIGMDHFAKPDDELSILQNEGRLHRNFQ
GYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRPYYESVDKLGHALWKGCSLNRDDEIRR
VVIKQLICHFDLDMAQIDEKLGINFEEYFSEDLKLLQTFIDDKLVDITDRKITISPTGRL
LIRNICICFDVYYREKARQQQFSRVI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaaatacaattacagcggtccccgttatacgtcataccctacggcattggaa
tttgatgactcttttactgaagagaagctactcacttccattgcaaacagcaaaagcgat
aagttatctctttatctgcatatccctttctgcgctaagctttgctactactgcggctgt
aataaggtgatcactcgtcaccaacataaagccgatcaatatatcgaatacctagctgct
gaaatcgttaaacgtgctccgctgtttaagaactaccttgtaactcaaattcactggggt
ggcggtacaccgacctttttaagcccagatcagatcctaaagctctcttcacttatcaaa
gagcacttcaatgtcgctgataaaggcgaatactctatcgaagtggatccacgtgagatt
gagctctctatgcttgatacgcttaaagaagcgggctttaaccgcatctctatcggtgta
caagacttcaataaaaaggttcaaatcgcggtaaaccgtgagcaagatgagcagttcatc
tttgacctgatggccagagcaaaagagctaggctttgtttcaacaaacattgaccttatc
tatggcctgccacaccagacacctgagactttcgcagagacaatgcagcgcgtgctagat
ctcgacccagatcgtttatctgtctttaactacgcacatctgcctgcccgttttgcagct
cagcgtaagattaaagatgaagatctagcatcacctcagcagaagctagatatgctccac
cagactatcgaaaccttaacgggtgcagggtaccaatacataggtatggatcactttgct
aagccagatgatgaactgtcgattctgcaaaatgaaggtcgtctgcacagaaacttccaa
ggttataccactcaagaggagtgcgacctattgggactgggtgtatcatcaatcagccag
atcggtgactgttacgctcaaaaccaaaaagacattcgcccttactatgagtcagtagat
aagttaggtcatgcattgtggaaaggctgtagcttaaaccgtgacgatgagatccgtcgt
gtggtgattaagcagcttatctgtcattttgaccttgatatggctcaaatcgatgagaaa
ctaggtattaactttgaagagtacttcagtgaagaccttaaactactgcaaacctttatc
gatgataagctagtcgacatcacagacagaaagatcaccatcagccctactggccgtttg
ttgatccgtaatatctgtatctgttttgatgtttactaccgtgaaaaggcaagacagcag
caattctctcgcgttatttaa
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